Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CDH16O75309 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CDH16O75309 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
CDH16O75309 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
CDH16O75309 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.21
CDH16O75309 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CDH16O75309 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CDH16O75309 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.33■□□□□ 0.21
CDH16O75309 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
CDH16O75309 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CDH16O75309 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDH16O75309 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDH16O75309 AC106881.1-201ENST00000605849 3329 ntBASIC16.33■□□□□ 0.2
CDH16O75309 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CDH16O75309 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDH16O75309 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDH16O75309 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16.33■□□□□ 0.2
CDH16O75309 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
CDH16O75309 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.33■□□□□ 0.2
CDH16O75309 RNU1-129P-201ENST00000384064 167 ntBASIC16.33■□□□□ 0.2
CDH16O75309 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CDH16O75309 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.33■□□□□ 0.2
CDH16O75309 SCARNA2-201ENST00000458748 420 ntBASIC16.33■□□□□ 0.2
CDH16O75309 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.33■□□□□ 0.2
CDH16O75309 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.33■□□□□ 0.2
CDH16O75309 KRT126P-201ENST00000549467 1181 ntBASIC16.33■□□□□ 0.2
CDH16O75309 U1.21-201ENST00000580816 167 ntBASIC16.33■□□□□ 0.2
CDH16O75309 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDH16O75309 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CDH16O75309 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDH16O75309 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CDH16O75309 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CDH16O75309 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CDH16O75309 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CDH16O75309 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CDH16O75309 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDH16O75309 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC16.33■□□□□ 0.2
CDH16O75309 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDH16O75309 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDH16O75309 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDH16O75309 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.33■□□□□ 0.2
CDH16O75309 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC16.33■□□□□ 0.2
CDH16O75309 AC007292.2-201ENST00000593524 1812 ntBASIC16.33■□□□□ 0.2
CDH16O75309 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
CDH16O75309 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDH16O75309 AC112693.3-201ENST00000624819 1983 ntBASIC16.33■□□□□ 0.2
CDH16O75309 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.33■□□□□ 0.2
CDH16O75309 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CDH16O75309 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CDH16O75309 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CDH16O75309 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDH16O75309 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDH16O75309 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDH16O75309 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDH16O75309 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CDH16O75309 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDH16O75309 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDH16O75309 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.32■□□□□ 0.2
CDH16O75309 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDH16O75309 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
CDH16O75309 TSPY19P-201ENST00000418461 509 ntBASIC16.32■□□□□ 0.2
CDH16O75309 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.32■□□□□ 0.2
CDH16O75309 AL450487.1-201ENST00000426799 995 ntBASIC16.32■□□□□ 0.2
CDH16O75309 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CDH16O75309 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CDH16O75309 TSPY18P-201ENST00000441642 509 ntBASIC16.32■□□□□ 0.2
CDH16O75309 AC093724.1-201ENST00000448659 1027 ntBASIC16.32■□□□□ 0.2
CDH16O75309 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CDH16O75309 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDH16O75309 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC16.32■□□□□ 0.2
CDH16O75309 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC16.32■□□□□ 0.2
CDH16O75309 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDH16O75309 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.32■□□□□ 0.2
CDH16O75309 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CDH16O75309 AC091304.2-201ENST00000564639 760 ntBASIC16.32■□□□□ 0.2
CDH16O75309 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.32■□□□□ 0.2
CDH16O75309 AC025062.2-201ENST00000605477 670 ntBASIC16.32■□□□□ 0.2
CDH16O75309 AL365330.1-201ENST00000607459 531 ntBASIC16.32■□□□□ 0.2
CDH16O75309 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CDH16O75309 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CDH16O75309 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CDH16O75309 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CDH16O75309 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CDH16O75309 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC16.32■□□□□ 0.2
CDH16O75309 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDH16O75309 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CDH16O75309 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDH16O75309 GSN-203ENST00000373808 2664 ntTSL 2 BASIC16.32■□□□□ 0.2
CDH16O75309 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CDH16O75309 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC16.31■□□□□ 0.2
CDH16O75309 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH16O75309 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH16O75309 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH16O75309 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH16O75309 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH16O75309 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CDH16O75309 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC16.31■□□□□ 0.2
CDH16O75309 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDH16O75309 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH16O75309 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms