Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PFDN1O60925 STX16-NPEPL1-202ENST00000530122 3433 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
PFDN1O60925 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
PFDN1O60925 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PFDN1O60925 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC14.38□□□□□ -0.11
PFDN1O60925 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC14.38□□□□□ -0.11
PFDN1O60925 AL512625.2-201ENST00000417533 625 ntBASIC14.38□□□□□ -0.11
PFDN1O60925 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC14.38□□□□□ -0.11
PFDN1O60925 AC093787.1-201ENST00000450396 207 ntBASIC14.38□□□□□ -0.11
PFDN1O60925 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC14.38□□□□□ -0.11
PFDN1O60925 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC14.38□□□□□ -0.11
PFDN1O60925 Z85996.1-201ENST00000494644 937 ntBASIC14.38□□□□□ -0.11
PFDN1O60925 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC14.38□□□□□ -0.11
PFDN1O60925 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC14.38□□□□□ -0.11
PFDN1O60925 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC14.38□□□□□ -0.11
PFDN1O60925 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
PFDN1O60925 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
PFDN1O60925 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PFDN1O60925 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PFDN1O60925 PIK3CG-205ENST00000496166 5197 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PFDN1O60925 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
PFDN1O60925 AC011474.4-201ENST00000623523 2076 ntBASIC14.38□□□□□ -0.11
PFDN1O60925 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC14.38□□□□□ -0.11
PFDN1O60925 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
PFDN1O60925 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.38□□□□□ -0.11
PFDN1O60925 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC14.38□□□□□ -0.11
PFDN1O60925 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
PFDN1O60925 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
PFDN1O60925 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PFDN1O60925 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PFDN1O60925 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC14.38□□□□□ -0.11
PFDN1O60925 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC14.38□□□□□ -0.11
PFDN1O60925 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC14.38□□□□□ -0.11
PFDN1O60925 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
PFDN1O60925 AC112693.3-201ENST00000624819 1983 ntBASIC14.38□□□□□ -0.11
PFDN1O60925 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PFDN1O60925 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
PFDN1O60925 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PFDN1O60925 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
PFDN1O60925 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PFDN1O60925 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC14.38□□□□□ -0.11
PFDN1O60925 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PFDN1O60925 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC14.38□□□□□ -0.11
PFDN1O60925 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PFDN1O60925 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PFDN1O60925 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PFDN1O60925 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
PFDN1O60925 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PFDN1O60925 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
PFDN1O60925 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC14.37□□□□□ -0.11
PFDN1O60925 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
PFDN1O60925 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PFDN1O60925 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PFDN1O60925 ARHGAP45-210ENST00000590214 4191 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
PFDN1O60925 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PFDN1O60925 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
PFDN1O60925 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC14.37□□□□□ -0.11
PFDN1O60925 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC14.37□□□□□ -0.11
PFDN1O60925 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PFDN1O60925 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC14.37□□□□□ -0.11
PFDN1O60925 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PFDN1O60925 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC14.37□□□□□ -0.11
PFDN1O60925 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC14.37□□□□□ -0.11
PFDN1O60925 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PFDN1O60925 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PFDN1O60925 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC14.37□□□□□ -0.11
PFDN1O60925 TRABD2B-202ENST00000606738 7034 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PFDN1O60925 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC14.37□□□□□ -0.11
PFDN1O60925 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC14.37□□□□□ -0.11
PFDN1O60925 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PFDN1O60925 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PFDN1O60925 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC14.37□□□□□ -0.11
PFDN1O60925 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC14.37□□□□□ -0.11
PFDN1O60925 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PFDN1O60925 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PFDN1O60925 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PFDN1O60925 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC14.37□□□□□ -0.11
PFDN1O60925 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PFDN1O60925 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PFDN1O60925 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
PFDN1O60925 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
PFDN1O60925 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
PFDN1O60925 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
PFDN1O60925 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PFDN1O60925 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PFDN1O60925 MST1P2-201ENST00000457982 2291 ntBASIC14.36□□□□□ -0.11
PFDN1O60925 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC14.36□□□□□ -0.11
PFDN1O60925 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
PFDN1O60925 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PFDN1O60925 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PFDN1O60925 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC14.36□□□□□ -0.11
PFDN1O60925 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PFDN1O60925 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PFDN1O60925 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC14.36□□□□□ -0.11
PFDN1O60925 GRAMD1B-216ENST00000638157 3849 ntTSL 5 BASIC14.36□□□□□ -0.11
PFDN1O60925 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC14.36□□□□□ -0.11
PFDN1O60925 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PFDN1O60925 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC14.36□□□□□ -0.11
PFDN1O60925 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
PFDN1O60925 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms