Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC15.81■□□□□ 0.12
PEX1O43933 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC15.81■□□□□ 0.12
PEX1O43933 MIR4751-201ENST00000578027 74 ntBASIC15.81■□□□□ 0.12
PEX1O43933 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.81■□□□□ 0.12
PEX1O43933 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
PEX1O43933 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
PEX1O43933 AC016027.1-202ENST00000607927 1699 ntBASIC15.81■□□□□ 0.12
PEX1O43933 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.81■□□□□ 0.12
PEX1O43933 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
PEX1O43933 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PEX1O43933 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC15.81■□□□□ 0.12
PEX1O43933 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.81■□□□□ 0.12
PEX1O43933 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PEX1O43933 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
PEX1O43933 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PEX1O43933 PRAL-201ENST00000624952 3286 ntBASIC15.81■□□□□ 0.12
PEX1O43933 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PEX1O43933 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC15.81■□□□□ 0.12
PEX1O43933 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC15.81■□□□□ 0.12
PEX1O43933 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
PEX1O43933 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
PEX1O43933 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PEX1O43933 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
PEX1O43933 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PEX1O43933 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PEX1O43933 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
PEX1O43933 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
PEX1O43933 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC15.8■□□□□ 0.12
PEX1O43933 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PEX1O43933 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PEX1O43933 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PEX1O43933 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.8■□□□□ 0.12
PEX1O43933 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
PEX1O43933 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
PEX1O43933 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PEX1O43933 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
PEX1O43933 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PEX1O43933 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
PEX1O43933 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC15.8■□□□□ 0.12
PEX1O43933 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PEX1O43933 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PEX1O43933 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PEX1O43933 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC15.8■□□□□ 0.12
PEX1O43933 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC15.8■□□□□ 0.12
PEX1O43933 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC15.8■□□□□ 0.12
PEX1O43933 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC15.8■□□□□ 0.12
PEX1O43933 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.8■□□□□ 0.12
PEX1O43933 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PEX1O43933 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PEX1O43933 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC15.8■□□□□ 0.12
PEX1O43933 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC15.8■□□□□ 0.12
PEX1O43933 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC15.8■□□□□ 0.12
PEX1O43933 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
PEX1O43933 AC004790.2-201ENST00000623588 572 ntBASIC15.8■□□□□ 0.12
PEX1O43933 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC15.8■□□□□ 0.12
PEX1O43933 AL805961.1-202ENST00000641562 540 ntBASIC15.8■□□□□ 0.12
PEX1O43933 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PEX1O43933 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PEX1O43933 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PEX1O43933 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PEX1O43933 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
PEX1O43933 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.8■□□□□ 0.12
PEX1O43933 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PEX1O43933 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
PEX1O43933 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PEX1O43933 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PEX1O43933 SNX18-202ENST00000343017 3140 ntBASIC15.8■□□□□ 0.12
PEX1O43933 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC15.8■□□□□ 0.12
PEX1O43933 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PEX1O43933 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC15.8■□□□□ 0.12
PEX1O43933 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.8■□□□□ 0.12
PEX1O43933 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PEX1O43933 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC15.8■□□□□ 0.12
PEX1O43933 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PEX1O43933 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PEX1O43933 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
PEX1O43933 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PEX1O43933 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.79■□□□□ 0.12
PEX1O43933 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC15.79■□□□□ 0.12
PEX1O43933 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PEX1O43933 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PEX1O43933 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
PEX1O43933 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PEX1O43933 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PEX1O43933 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
PEX1O43933 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PEX1O43933 ACTG1P4-201ENST00000425123 1122 ntBASIC15.79■□□□□ 0.12
PEX1O43933 VN2R19P-201ENST00000442399 1052 ntBASIC15.79■□□□□ 0.12
PEX1O43933 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC15.79■□□□□ 0.12
PEX1O43933 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC15.79■□□□□ 0.12
PEX1O43933 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC15.79■□□□□ 0.12
PEX1O43933 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC15.79■□□□□ 0.12
PEX1O43933 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC15.79■□□□□ 0.12
PEX1O43933 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PEX1O43933 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PEX1O43933 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PEX1O43933 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PEX1O43933 AC007292.2-201ENST00000593524 1812 ntBASIC15.79■□□□□ 0.12
PEX1O43933 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PEX1O43933 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms