Protein–RNA interactions for Protein: O43525

KCNQ3, Potassium voltage-gated channel subfamily KQT member 3, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3O43525 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
KCNQ3O43525 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
KCNQ3O43525 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
KCNQ3O43525 NSL1-201ENST00000366976 722 ntTSL 2 BASIC20.46■□□□□ 0.87
KCNQ3O43525 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
KCNQ3O43525 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC20.46■□□□□ 0.87
KCNQ3O43525 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC20.46■□□□□ 0.87
KCNQ3O43525 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
KCNQ3O43525 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC20.46■□□□□ 0.87
KCNQ3O43525 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
KCNQ3O43525 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
KCNQ3O43525 AC007389.4-201ENST00000454674 793 ntBASIC20.46■□□□□ 0.87
KCNQ3O43525 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC20.46■□□□□ 0.87
KCNQ3O43525 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC20.46■□□□□ 0.87
KCNQ3O43525 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC20.46■□□□□ 0.87
KCNQ3O43525 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC20.46■□□□□ 0.87
KCNQ3O43525 AC017083.2-201ENST00000608069 979 ntBASIC20.46■□□□□ 0.87
KCNQ3O43525 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
KCNQ3O43525 MIR6775-201ENST00000617557 69 ntBASIC20.46■□□□□ 0.87
KCNQ3O43525 MIR6752-201ENST00000618442 71 ntBASIC20.46■□□□□ 0.87
KCNQ3O43525 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
KCNQ3O43525 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
KCNQ3O43525 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
KCNQ3O43525 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC20.46■□□□□ 0.87
KCNQ3O43525 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
KCNQ3O43525 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
KCNQ3O43525 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.87
KCNQ3O43525 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
KCNQ3O43525 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
KCNQ3O43525 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
KCNQ3O43525 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
KCNQ3O43525 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC20.45■□□□□ 0.86
KCNQ3O43525 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC20.45■□□□□ 0.86
KCNQ3O43525 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC20.45■□□□□ 0.86
KCNQ3O43525 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
KCNQ3O43525 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
KCNQ3O43525 NEU3-203ENST00000529024 581 ntTSL 3 BASIC20.45■□□□□ 0.86
KCNQ3O43525 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC20.45■□□□□ 0.86
KCNQ3O43525 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC20.45■□□□□ 0.86
KCNQ3O43525 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC20.45■□□□□ 0.86
KCNQ3O43525 AC036164.1-201ENST00000570544 333 ntBASIC20.45■□□□□ 0.86
KCNQ3O43525 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC20.45■□□□□ 0.86
KCNQ3O43525 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
KCNQ3O43525 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
KCNQ3O43525 ABBA01031660.1-201ENST00000635219 756 ntBASIC20.45■□□□□ 0.86
KCNQ3O43525 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
KCNQ3O43525 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
KCNQ3O43525 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
KCNQ3O43525 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC20.45■□□□□ 0.86
KCNQ3O43525 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
KCNQ3O43525 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
KCNQ3O43525 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
KCNQ3O43525 AL596087.1-201ENST00000400979 1969 ntBASIC20.45■□□□□ 0.86
KCNQ3O43525 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
KCNQ3O43525 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
KCNQ3O43525 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
KCNQ3O43525 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC20.44■□□□□ 0.86
KCNQ3O43525 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
KCNQ3O43525 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
KCNQ3O43525 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
KCNQ3O43525 LINC02199-201ENST00000506655 2702 ntBASIC20.44■□□□□ 0.86
KCNQ3O43525 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC20.44■□□□□ 0.86
KCNQ3O43525 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
KCNQ3O43525 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
KCNQ3O43525 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
KCNQ3O43525 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
KCNQ3O43525 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
KCNQ3O43525 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC20.44■□□□□ 0.86
KCNQ3O43525 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC20.44■□□□□ 0.86
KCNQ3O43525 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC20.44■□□□□ 0.86
KCNQ3O43525 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC20.44■□□□□ 0.86
KCNQ3O43525 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC20.44■□□□□ 0.86
KCNQ3O43525 SLED1-202ENST00000512051 380 ntBASIC20.44■□□□□ 0.86
KCNQ3O43525 ORC6-206ENST00000568364 888 ntTSL 5 BASIC20.44■□□□□ 0.86
KCNQ3O43525 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC20.44■□□□□ 0.86
KCNQ3O43525 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
KCNQ3O43525 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC20.44■□□□□ 0.86
KCNQ3O43525 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
KCNQ3O43525 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
KCNQ3O43525 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC20.44■□□□□ 0.86
KCNQ3O43525 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
KCNQ3O43525 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC20.44■□□□□ 0.86
KCNQ3O43525 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC20.44■□□□□ 0.86
KCNQ3O43525 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
KCNQ3O43525 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
KCNQ3O43525 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
KCNQ3O43525 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC20.44■□□□□ 0.86
KCNQ3O43525 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
KCNQ3O43525 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
KCNQ3O43525 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
KCNQ3O43525 SP100-205ENST00000409824 1802 ntTSL 5 BASIC20.43■□□□□ 0.86
KCNQ3O43525 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC20.43■□□□□ 0.86
KCNQ3O43525 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
KCNQ3O43525 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
KCNQ3O43525 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
KCNQ3O43525 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC20.43■□□□□ 0.86
KCNQ3O43525 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
KCNQ3O43525 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
KCNQ3O43525 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC20.43■□□□□ 0.86
KCNQ3O43525 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms