Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
MSI1O43347 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
MSI1O43347 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.71■□□□□ 0.27
MSI1O43347 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
MSI1O43347 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
MSI1O43347 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
MSI1O43347 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
MSI1O43347 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.7■□□□□ 0.26
MSI1O43347 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MSI1O43347 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
MSI1O43347 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MSI1O43347 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MSI1O43347 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
MSI1O43347 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
MSI1O43347 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
MSI1O43347 AL596257.1-201ENST00000641463 2694 ntBASIC16.7■□□□□ 0.26
MSI1O43347 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
MSI1O43347 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
MSI1O43347 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.7■□□□□ 0.26
MSI1O43347 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
MSI1O43347 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MSI1O43347 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
MSI1O43347 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MSI1O43347 RAC2-204ENST00000406508 893 ntTSL 5 BASIC16.7■□□□□ 0.26
MSI1O43347 MRPS18AP1-201ENST00000414458 589 ntBASIC16.7■□□□□ 0.26
MSI1O43347 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC16.7■□□□□ 0.26
MSI1O43347 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16.7■□□□□ 0.26
MSI1O43347 FAM8A3P-201ENST00000427218 844 ntBASIC16.7■□□□□ 0.26
MSI1O43347 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC16.7■□□□□ 0.26
MSI1O43347 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
MSI1O43347 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
MSI1O43347 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
MSI1O43347 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC16.7■□□□□ 0.26
MSI1O43347 AJ011932.1-201ENST00000621707 465 ntBASIC16.7■□□□□ 0.26
MSI1O43347 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16.7■□□□□ 0.26
MSI1O43347 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.7■□□□□ 0.26
MSI1O43347 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
MSI1O43347 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
MSI1O43347 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
MSI1O43347 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MSI1O43347 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.7■□□□□ 0.26
MSI1O43347 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
MSI1O43347 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MSI1O43347 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.7■□□□□ 0.26
MSI1O43347 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
MSI1O43347 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
MSI1O43347 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
MSI1O43347 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
MSI1O43347 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
MSI1O43347 AC087499.5-201ENST00000452760 1342 ntBASIC16.7■□□□□ 0.26
MSI1O43347 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MSI1O43347 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
MSI1O43347 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
MSI1O43347 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
MSI1O43347 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
MSI1O43347 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
MSI1O43347 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
MSI1O43347 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MSI1O43347 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.69■□□□□ 0.26
MSI1O43347 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
MSI1O43347 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
MSI1O43347 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MSI1O43347 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.69■□□□□ 0.26
MSI1O43347 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MSI1O43347 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MSI1O43347 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MSI1O43347 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
MSI1O43347 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
MSI1O43347 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
MSI1O43347 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC16.69■□□□□ 0.26
MSI1O43347 MIR661-201ENST00000384842 89 ntBASIC16.69■□□□□ 0.26
MSI1O43347 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.69■□□□□ 0.26
MSI1O43347 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.69■□□□□ 0.26
MSI1O43347 RN7SL618P-201ENST00000477850 296 ntBASIC16.69■□□□□ 0.26
MSI1O43347 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC16.69■□□□□ 0.26
MSI1O43347 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MSI1O43347 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
MSI1O43347 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC16.69■□□□□ 0.26
MSI1O43347 AC010336.2-201ENST00000564226 506 ntBASIC16.69■□□□□ 0.26
MSI1O43347 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC16.69■□□□□ 0.26
MSI1O43347 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.69■□□□□ 0.26
MSI1O43347 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MSI1O43347 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
MSI1O43347 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.69■□□□□ 0.26
MSI1O43347 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.69■□□□□ 0.26
MSI1O43347 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
MSI1O43347 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MSI1O43347 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
MSI1O43347 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.68■□□□□ 0.26
MSI1O43347 AC022144.1-201ENST00000602255 1580 ntBASIC16.68■□□□□ 0.26
MSI1O43347 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
MSI1O43347 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
MSI1O43347 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
MSI1O43347 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
MSI1O43347 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MSI1O43347 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MSI1O43347 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
MSI1O43347 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC16.68■□□□□ 0.26
MSI1O43347 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
MSI1O43347 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms