Protein–RNA interactions for Protein: H3BVE0

BOLA2-SMG1P6, BOLA2-SMG1P6 readthrough (Fragment), humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BOLA2-SMG1P6H3BVE0 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC14.1□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 NIFKP9-201ENST00000419265 221 ntBASIC14.1□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 AL353807.1-201ENST00000427475 662 ntBASIC14.1□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC14.1□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 AL445675.2-201ENST00000620291 557 ntBASIC14.1□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 LINC00895-201ENST00000629028 1637 ntBASIC14.1□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.1□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC14.1□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC14.1□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC14.1□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC14.1□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC14.1□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC14.1□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.1□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC14.09□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 MAPT-IT1-201ENST00000624111 3016 ntBASIC14.09□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.09□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC14.09□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC14.09□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC14.09□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 DENND3-207ENST00000518347 850 ntTSL 2 BASIC14.09□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC14.09□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 RNF121-214ENST00000533380 870 ntTSL 3 BASIC14.09□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC14.09□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 MMD2-204ENST00000612910 778 ntTSL 5 BASIC14.09□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 AC131212.4-201ENST00000623606 975 ntBASIC14.09□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC14.09□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC14.09□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC14.09□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC14.09□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC14.09□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC14.09□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC14.09□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.08□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC14.08□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms