Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRDV1A0A1B0GX56 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRDV1A0A1B0GX56 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.21□□□□□ -0.13
TRDV1A0A1B0GX56 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.21□□□□□ -0.13
TRDV1A0A1B0GX56 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.21□□□□□ -0.13
TRDV1A0A1B0GX56 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRDV1A0A1B0GX56 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRDV1A0A1B0GX56 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRDV1A0A1B0GX56 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
TRDV1A0A1B0GX56 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRDV1A0A1B0GX56 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRDV1A0A1B0GX56 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC14.21□□□□□ -0.13
TRDV1A0A1B0GX56 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRDV1A0A1B0GX56 CD99-202ENST00000381180 530 ntTSL 2 BASIC14.21□□□□□ -0.13
TRDV1A0A1B0GX56 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRDV1A0A1B0GX56 FXN-203ENST00000396366 922 ntTSL 2 BASIC14.21□□□□□ -0.13
TRDV1A0A1B0GX56 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC14.21□□□□□ -0.13
TRDV1A0A1B0GX56 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC14.21□□□□□ -0.13
TRDV1A0A1B0GX56 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
TRDV1A0A1B0GX56 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRDV1A0A1B0GX56 LTBR-211ENST00000543190 785 ntTSL 3 BASIC14.21□□□□□ -0.13
TRDV1A0A1B0GX56 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC14.21□□□□□ -0.13
TRDV1A0A1B0GX56 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.21□□□□□ -0.13
TRDV1A0A1B0GX56 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC14.21□□□□□ -0.13
TRDV1A0A1B0GX56 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
TRDV1A0A1B0GX56 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRDV1A0A1B0GX56 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
TRDV1A0A1B0GX56 AL805961.1-202ENST00000641562 540 ntBASIC14.21□□□□□ -0.13
TRDV1A0A1B0GX56 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
TRDV1A0A1B0GX56 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
TRDV1A0A1B0GX56 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRDV1A0A1B0GX56 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.21□□□□□ -0.13
TRDV1A0A1B0GX56 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRDV1A0A1B0GX56 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRDV1A0A1B0GX56 FGD5P1-202ENST00000614866 2498 ntBASIC14.21□□□□□ -0.13
TRDV1A0A1B0GX56 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
TRDV1A0A1B0GX56 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
TRDV1A0A1B0GX56 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TRDV1A0A1B0GX56 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC14.21□□□□□ -0.14
TRDV1A0A1B0GX56 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TRDV1A0A1B0GX56 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TRDV1A0A1B0GX56 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TRDV1A0A1B0GX56 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.14
TRDV1A0A1B0GX56 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TRDV1A0A1B0GX56 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
TRDV1A0A1B0GX56 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRDV1A0A1B0GX56 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
TRDV1A0A1B0GX56 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRDV1A0A1B0GX56 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.2□□□□□ -0.14
TRDV1A0A1B0GX56 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.2□□□□□ -0.14
TRDV1A0A1B0GX56 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
TRDV1A0A1B0GX56 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRDV1A0A1B0GX56 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRDV1A0A1B0GX56 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRDV1A0A1B0GX56 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
TRDV1A0A1B0GX56 AP001282.1-201ENST00000531301 1499 ntBASIC14.2□□□□□ -0.14
TRDV1A0A1B0GX56 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
TRDV1A0A1B0GX56 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
TRDV1A0A1B0GX56 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRDV1A0A1B0GX56 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRDV1A0A1B0GX56 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRDV1A0A1B0GX56 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRDV1A0A1B0GX56 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRDV1A0A1B0GX56 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC14.2□□□□□ -0.14
TRDV1A0A1B0GX56 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRDV1A0A1B0GX56 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC14.2□□□□□ -0.14
TRDV1A0A1B0GX56 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14.2□□□□□ -0.14
TRDV1A0A1B0GX56 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC14.2□□□□□ -0.14
TRDV1A0A1B0GX56 AP002383.4-201ENST00000442518 975 ntBASIC14.2□□□□□ -0.14
TRDV1A0A1B0GX56 LINC00265-3P-201ENST00000447588 903 ntBASIC14.2□□□□□ -0.14
TRDV1A0A1B0GX56 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC14.2□□□□□ -0.14
TRDV1A0A1B0GX56 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRDV1A0A1B0GX56 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC14.2□□□□□ -0.14
TRDV1A0A1B0GX56 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
TRDV1A0A1B0GX56 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
TRDV1A0A1B0GX56 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRDV1A0A1B0GX56 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
TRDV1A0A1B0GX56 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRDV1A0A1B0GX56 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRDV1A0A1B0GX56 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRDV1A0A1B0GX56 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.2□□□□□ -0.14
TRDV1A0A1B0GX56 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRDV1A0A1B0GX56 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRDV1A0A1B0GX56 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRDV1A0A1B0GX56 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC14.2□□□□□ -0.14
TRDV1A0A1B0GX56 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRDV1A0A1B0GX56 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRDV1A0A1B0GX56 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRDV1A0A1B0GX56 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRDV1A0A1B0GX56 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRDV1A0A1B0GX56 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC14.2□□□□□ -0.14
TRDV1A0A1B0GX56 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.2□□□□□ -0.14
TRDV1A0A1B0GX56 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC14.2□□□□□ -0.14
TRDV1A0A1B0GX56 PCDHA3-202ENST00000532566 4594 ntBASIC14.2□□□□□ -0.14
TRDV1A0A1B0GX56 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRDV1A0A1B0GX56 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRDV1A0A1B0GX56 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.2□□□□□ -0.14
TRDV1A0A1B0GX56 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.2□□□□□ -0.14
TRDV1A0A1B0GX56 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRDV1A0A1B0GX56 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 224 ms