Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
DDX49Q9Y6V7 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
DDX49Q9Y6V7 AC013268.4-201ENST00000637413 2228 ntBASIC19.45■□□□□ 0.7
DDX49Q9Y6V7 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
DDX49Q9Y6V7 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
DDX49Q9Y6V7 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
DDX49Q9Y6V7 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC19.45■□□□□ 0.7
DDX49Q9Y6V7 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
DDX49Q9Y6V7 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
DDX49Q9Y6V7 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
DDX49Q9Y6V7 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC19.45■□□□□ 0.7
DDX49Q9Y6V7 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC19.45■□□□□ 0.7
DDX49Q9Y6V7 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
DDX49Q9Y6V7 PON3-203ENST00000427422 894 ntTSL 3 BASIC19.45■□□□□ 0.7
DDX49Q9Y6V7 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC19.45■□□□□ 0.7
DDX49Q9Y6V7 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC19.45■□□□□ 0.7
DDX49Q9Y6V7 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
DDX49Q9Y6V7 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC19.45■□□□□ 0.7
DDX49Q9Y6V7 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
DDX49Q9Y6V7 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC19.45■□□□□ 0.7
DDX49Q9Y6V7 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
DDX49Q9Y6V7 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
DDX49Q9Y6V7 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC19.45■□□□□ 0.7
DDX49Q9Y6V7 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
DDX49Q9Y6V7 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
DDX49Q9Y6V7 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
DDX49Q9Y6V7 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
DDX49Q9Y6V7 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
DDX49Q9Y6V7 REM2-202ENST00000536884 1331 ntTSL 2 BASIC19.45■□□□□ 0.7
DDX49Q9Y6V7 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
DDX49Q9Y6V7 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
DDX49Q9Y6V7 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC19.45■□□□□ 0.7
DDX49Q9Y6V7 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC19.45■□□□□ 0.7
DDX49Q9Y6V7 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
DDX49Q9Y6V7 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
DDX49Q9Y6V7 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
DDX49Q9Y6V7 GGT4P-201ENST00000623672 1708 ntBASIC19.45■□□□□ 0.7
DDX49Q9Y6V7 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
DDX49Q9Y6V7 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC19.45■□□□□ 0.7
DDX49Q9Y6V7 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC19.45■□□□□ 0.7
DDX49Q9Y6V7 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
DDX49Q9Y6V7 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC19.44■□□□□ 0.7
DDX49Q9Y6V7 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
DDX49Q9Y6V7 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC19.44■□□□□ 0.7
DDX49Q9Y6V7 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
DDX49Q9Y6V7 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
DDX49Q9Y6V7 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
DDX49Q9Y6V7 PRAL-201ENST00000624952 3286 ntBASIC19.44■□□□□ 0.7
DDX49Q9Y6V7 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
DDX49Q9Y6V7 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
DDX49Q9Y6V7 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC19.44■□□□□ 0.7
DDX49Q9Y6V7 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
DDX49Q9Y6V7 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC19.44■□□□□ 0.7
DDX49Q9Y6V7 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
DDX49Q9Y6V7 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
DDX49Q9Y6V7 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
DDX49Q9Y6V7 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC19.44■□□□□ 0.7
DDX49Q9Y6V7 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
DDX49Q9Y6V7 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC19.44■□□□□ 0.7
DDX49Q9Y6V7 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
DDX49Q9Y6V7 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC19.44■□□□□ 0.7
DDX49Q9Y6V7 METTL23-205ENST00000588302 925 ntTSL 5 BASIC19.44■□□□□ 0.7
DDX49Q9Y6V7 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC19.44■□□□□ 0.7
DDX49Q9Y6V7 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC19.44■□□□□ 0.7
DDX49Q9Y6V7 AL513210.1-201ENST00000629608 234 ntBASIC19.44■□□□□ 0.7
DDX49Q9Y6V7 AC105339.1-204ENST00000636249 355 ntBASIC19.44■□□□□ 0.7
DDX49Q9Y6V7 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC19.44■□□□□ 0.7
DDX49Q9Y6V7 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC19.44■□□□□ 0.7
DDX49Q9Y6V7 AC022532.1-201ENST00000624563 1728 ntBASIC19.44■□□□□ 0.7
DDX49Q9Y6V7 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
DDX49Q9Y6V7 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC19.44■□□□□ 0.7
DDX49Q9Y6V7 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
DDX49Q9Y6V7 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
DDX49Q9Y6V7 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC19.44■□□□□ 0.7
DDX49Q9Y6V7 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
DDX49Q9Y6V7 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC19.44■□□□□ 0.7
DDX49Q9Y6V7 AC006449.6-201ENST00000612330 2296 ntBASIC19.44■□□□□ 0.7
DDX49Q9Y6V7 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
DDX49Q9Y6V7 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
DDX49Q9Y6V7 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC19.44■□□□□ 0.7
DDX49Q9Y6V7 GOLGA6L17P-202ENST00000614358 1398 ntBASIC19.44■□□□□ 0.7
DDX49Q9Y6V7 AL021920.2-201ENST00000624828 1351 ntBASIC19.44■□□□□ 0.7
DDX49Q9Y6V7 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC19.44■□□□□ 0.7
DDX49Q9Y6V7 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
DDX49Q9Y6V7 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
DDX49Q9Y6V7 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
DDX49Q9Y6V7 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
DDX49Q9Y6V7 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
DDX49Q9Y6V7 AP005117.1-202ENST00000581724 1908 ntBASIC19.43■□□□□ 0.7
DDX49Q9Y6V7 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
DDX49Q9Y6V7 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
DDX49Q9Y6V7 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
DDX49Q9Y6V7 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
DDX49Q9Y6V7 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
DDX49Q9Y6V7 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
DDX49Q9Y6V7 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
DDX49Q9Y6V7 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
DDX49Q9Y6V7 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
DDX49Q9Y6V7 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
DDX49Q9Y6V7 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms