Protein–RNA interactions for Protein: Q9UQR0

SCML2, Sex comb on midleg-like protein 2, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML2Q9UQR0 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SCML2Q9UQR0 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SCML2Q9UQR0 TARDBPP1-201ENST00000442013 1203 ntBASIC16.68■□□□□ 0.26
SCML2Q9UQR0 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC16.68■□□□□ 0.26
SCML2Q9UQR0 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC16.68■□□□□ 0.26
SCML2Q9UQR0 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC16.68■□□□□ 0.26
SCML2Q9UQR0 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.68■□□□□ 0.26
SCML2Q9UQR0 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.68■□□□□ 0.26
SCML2Q9UQR0 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SCML2Q9UQR0 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC16.68■□□□□ 0.26
SCML2Q9UQR0 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC16.68■□□□□ 0.26
SCML2Q9UQR0 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.68■□□□□ 0.26
SCML2Q9UQR0 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC16.68■□□□□ 0.26
SCML2Q9UQR0 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.68■□□□□ 0.26
SCML2Q9UQR0 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC16.68■□□□□ 0.26
SCML2Q9UQR0 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC16.68■□□□□ 0.26
SCML2Q9UQR0 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
SCML2Q9UQR0 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SCML2Q9UQR0 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SCML2Q9UQR0 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SCML2Q9UQR0 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.68■□□□□ 0.26
SCML2Q9UQR0 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.68■□□□□ 0.26
SCML2Q9UQR0 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SCML2Q9UQR0 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
SCML2Q9UQR0 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SCML2Q9UQR0 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SCML2Q9UQR0 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SCML2Q9UQR0 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
SCML2Q9UQR0 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SCML2Q9UQR0 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SCML2Q9UQR0 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SCML2Q9UQR0 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
SCML2Q9UQR0 PCDHB19P-201ENST00000570871 2371 ntBASIC16.67■□□□□ 0.26
SCML2Q9UQR0 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SCML2Q9UQR0 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
SCML2Q9UQR0 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SCML2Q9UQR0 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.67■□□□□ 0.26
SCML2Q9UQR0 GRN-214ENST00000589265 1632 ntTSL 5 BASIC16.67■□□□□ 0.26
SCML2Q9UQR0 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SCML2Q9UQR0 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SCML2Q9UQR0 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SCML2Q9UQR0 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SCML2Q9UQR0 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.67■□□□□ 0.26
SCML2Q9UQR0 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SCML2Q9UQR0 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
SCML2Q9UQR0 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.67■□□□□ 0.26
SCML2Q9UQR0 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
SCML2Q9UQR0 AC136604.1-201ENST00000418535 575 ntBASIC16.67■□□□□ 0.26
SCML2Q9UQR0 GNAQP1-201ENST00000444815 1067 ntBASIC16.67■□□□□ 0.26
SCML2Q9UQR0 CRB3P1-201ENST00000449338 276 ntBASIC16.67■□□□□ 0.26
SCML2Q9UQR0 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.67■□□□□ 0.26
SCML2Q9UQR0 COX20P2-201ENST00000452636 358 ntBASIC16.67■□□□□ 0.26
SCML2Q9UQR0 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.67■□□□□ 0.26
SCML2Q9UQR0 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC16.67■□□□□ 0.26
SCML2Q9UQR0 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC16.67■□□□□ 0.26
SCML2Q9UQR0 AC190387.1-201ENST00000551683 408 ntBASIC16.67■□□□□ 0.26
SCML2Q9UQR0 HNRNPUP1-201ENST00000554987 333 ntBASIC16.67■□□□□ 0.26
SCML2Q9UQR0 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.67■□□□□ 0.26
SCML2Q9UQR0 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC16.67■□□□□ 0.26
SCML2Q9UQR0 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SCML2Q9UQR0 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
SCML2Q9UQR0 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SCML2Q9UQR0 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
SCML2Q9UQR0 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SCML2Q9UQR0 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SCML2Q9UQR0 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.66■□□□□ 0.26
SCML2Q9UQR0 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.66■□□□□ 0.26
SCML2Q9UQR0 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
SCML2Q9UQR0 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SCML2Q9UQR0 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SCML2Q9UQR0 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SCML2Q9UQR0 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.66■□□□□ 0.26
SCML2Q9UQR0 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SCML2Q9UQR0 SPDYE19P-201ENST00000338590 713 ntBASIC16.66■□□□□ 0.26
SCML2Q9UQR0 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
SCML2Q9UQR0 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SCML2Q9UQR0 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.66■□□□□ 0.26
SCML2Q9UQR0 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
SCML2Q9UQR0 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SCML2Q9UQR0 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.66■□□□□ 0.26
SCML2Q9UQR0 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC16.66■□□□□ 0.26
SCML2Q9UQR0 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC16.66■□□□□ 0.26
SCML2Q9UQR0 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
SCML2Q9UQR0 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.66■□□□□ 0.26
SCML2Q9UQR0 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SCML2Q9UQR0 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.66■□□□□ 0.26
SCML2Q9UQR0 TIMM17BP1-201ENST00000545713 516 ntBASIC16.66■□□□□ 0.26
SCML2Q9UQR0 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SCML2Q9UQR0 COX11-202ENST00000571584 1108 ntTSL 2 BASIC16.66■□□□□ 0.26
SCML2Q9UQR0 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.66■□□□□ 0.26
SCML2Q9UQR0 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.66■□□□□ 0.26
SCML2Q9UQR0 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.66■□□□□ 0.26
SCML2Q9UQR0 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SCML2Q9UQR0 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
SCML2Q9UQR0 AC007541.1-201ENST00000570282 1469 ntBASIC16.66■□□□□ 0.26
SCML2Q9UQR0 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SCML2Q9UQR0 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
SCML2Q9UQR0 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SCML2Q9UQR0 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SCML2Q9UQR0 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms