Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 AF228730.6-201ENST00000641497 218 ntBASIC20.82■□□□□ 0.92
TRIM35Q9UPQ4 AC084121.3-201ENST00000641716 218 ntBASIC20.82■□□□□ 0.92
TRIM35Q9UPQ4 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRIM35Q9UPQ4 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRIM35Q9UPQ4 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TRIM35Q9UPQ4 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC20.82■□□□□ 0.92
TRIM35Q9UPQ4 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC20.82■□□□□ 0.92
TRIM35Q9UPQ4 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
TRIM35Q9UPQ4 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC20.82■□□□□ 0.92
TRIM35Q9UPQ4 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC20.82■□□□□ 0.92
TRIM35Q9UPQ4 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRIM35Q9UPQ4 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC20.81■□□□□ 0.92
TRIM35Q9UPQ4 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC20.81■□□□□ 0.92
TRIM35Q9UPQ4 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM35Q9UPQ4 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC20.81■□□□□ 0.92
TRIM35Q9UPQ4 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
TRIM35Q9UPQ4 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM35Q9UPQ4 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC20.81■□□□□ 0.92
TRIM35Q9UPQ4 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM35Q9UPQ4 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC20.81■□□□□ 0.92
TRIM35Q9UPQ4 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM35Q9UPQ4 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
TRIM35Q9UPQ4 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM35Q9UPQ4 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC20.81■□□□□ 0.92
TRIM35Q9UPQ4 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM35Q9UPQ4 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM35Q9UPQ4 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC20.81■□□□□ 0.92
TRIM35Q9UPQ4 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM35Q9UPQ4 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM35Q9UPQ4 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM35Q9UPQ4 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC20.81■□□□□ 0.92
TRIM35Q9UPQ4 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC20.81■□□□□ 0.92
TRIM35Q9UPQ4 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC20.81■□□□□ 0.92
TRIM35Q9UPQ4 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC20.81■□□□□ 0.92
TRIM35Q9UPQ4 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC20.81■□□□□ 0.92
TRIM35Q9UPQ4 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC20.81■□□□□ 0.92
TRIM35Q9UPQ4 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC20.81■□□□□ 0.92
TRIM35Q9UPQ4 AC074044.1-201ENST00000609673 707 ntBASIC20.81■□□□□ 0.92
TRIM35Q9UPQ4 AC008761.3-201ENST00000624803 892 ntBASIC20.81■□□□□ 0.92
TRIM35Q9UPQ4 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM35Q9UPQ4 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM35Q9UPQ4 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM35Q9UPQ4 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM35Q9UPQ4 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC20.8■□□□□ 0.92
TRIM35Q9UPQ4 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM35Q9UPQ4 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC20.8■□□□□ 0.92
TRIM35Q9UPQ4 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
TRIM35Q9UPQ4 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC20.8■□□□□ 0.92
TRIM35Q9UPQ4 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
TRIM35Q9UPQ4 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
TRIM35Q9UPQ4 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM35Q9UPQ4 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
TRIM35Q9UPQ4 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC20.8■□□□□ 0.92
TRIM35Q9UPQ4 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM35Q9UPQ4 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC20.8■□□□□ 0.92
TRIM35Q9UPQ4 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC20.8■□□□□ 0.92
TRIM35Q9UPQ4 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM35Q9UPQ4 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM35Q9UPQ4 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC20.8■□□□□ 0.92
TRIM35Q9UPQ4 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM35Q9UPQ4 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC20.8■□□□□ 0.92
TRIM35Q9UPQ4 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
TRIM35Q9UPQ4 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC20.8■□□□□ 0.92
TRIM35Q9UPQ4 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC20.8■□□□□ 0.92
TRIM35Q9UPQ4 AC104794.3-201ENST00000566840 1248 ntBASIC20.8■□□□□ 0.92
TRIM35Q9UPQ4 AC092337.1-201ENST00000568699 1129 ntBASIC20.8■□□□□ 0.92
TRIM35Q9UPQ4 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC20.8■□□□□ 0.92
TRIM35Q9UPQ4 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM35Q9UPQ4 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM35Q9UPQ4 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM35Q9UPQ4 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM35Q9UPQ4 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM35Q9UPQ4 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC20.8■□□□□ 0.92
TRIM35Q9UPQ4 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM35Q9UPQ4 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
TRIM35Q9UPQ4 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC20.8■□□□□ 0.92
TRIM35Q9UPQ4 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM35Q9UPQ4 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM35Q9UPQ4 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM35Q9UPQ4 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC20.79■□□□□ 0.92
TRIM35Q9UPQ4 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM35Q9UPQ4 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM35Q9UPQ4 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM35Q9UPQ4 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM35Q9UPQ4 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC20.79■□□□□ 0.92
TRIM35Q9UPQ4 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
TRIM35Q9UPQ4 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM35Q9UPQ4 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC20.79■□□□□ 0.92
TRIM35Q9UPQ4 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
TRIM35Q9UPQ4 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
TRIM35Q9UPQ4 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC20.79■□□□□ 0.92
TRIM35Q9UPQ4 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM35Q9UPQ4 CALY-203ENST00000368558 825 ntTSL 5 BASIC20.79■□□□□ 0.92
TRIM35Q9UPQ4 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC20.79■□□□□ 0.92
TRIM35Q9UPQ4 RAC2-202ENST00000401529 569 ntTSL 4 BASIC20.79■□□□□ 0.92
TRIM35Q9UPQ4 MTATP6P19-201ENST00000413797 659 ntBASIC20.79■□□□□ 0.92
TRIM35Q9UPQ4 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC20.79■□□□□ 0.92
TRIM35Q9UPQ4 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC20.79■□□□□ 0.92
TRIM35Q9UPQ4 FAM207CP-201ENST00000443486 507 ntBASIC20.79■□□□□ 0.92
TRIM35Q9UPQ4 GNAQP1-201ENST00000444815 1067 ntBASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms