Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP4E1Q9UPM8 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.74■□□□□ 0.27
AP4E1Q9UPM8 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP4E1Q9UPM8 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.74■□□□□ 0.27
AP4E1Q9UPM8 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
AP4E1Q9UPM8 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP4E1Q9UPM8 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP4E1Q9UPM8 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP4E1Q9UPM8 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP4E1Q9UPM8 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.74■□□□□ 0.27
AP4E1Q9UPM8 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
AP4E1Q9UPM8 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP4E1Q9UPM8 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP4E1Q9UPM8 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
AP4E1Q9UPM8 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP4E1Q9UPM8 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
AP4E1Q9UPM8 RBPMS2P1-201ENST00000437762 623 ntBASIC16.74■□□□□ 0.27
AP4E1Q9UPM8 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
AP4E1Q9UPM8 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.74■□□□□ 0.27
AP4E1Q9UPM8 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
AP4E1Q9UPM8 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
AP4E1Q9UPM8 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.74■□□□□ 0.27
AP4E1Q9UPM8 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP4E1Q9UPM8 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP4E1Q9UPM8 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP4E1Q9UPM8 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
AP4E1Q9UPM8 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
AP4E1Q9UPM8 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
AP4E1Q9UPM8 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP4E1Q9UPM8 AC132872.4-202ENST00000622924 2756 ntBASIC16.74■□□□□ 0.27
AP4E1Q9UPM8 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP4E1Q9UPM8 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
AP4E1Q9UPM8 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP4E1Q9UPM8 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP4E1Q9UPM8 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
AP4E1Q9UPM8 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP4E1Q9UPM8 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP4E1Q9UPM8 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.74■□□□□ 0.27
AP4E1Q9UPM8 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
AP4E1Q9UPM8 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP4E1Q9UPM8 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
AP4E1Q9UPM8 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP4E1Q9UPM8 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP4E1Q9UPM8 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
AP4E1Q9UPM8 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
AP4E1Q9UPM8 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.73■□□□□ 0.27
AP4E1Q9UPM8 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.73■□□□□ 0.27
AP4E1Q9UPM8 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16.73■□□□□ 0.27
AP4E1Q9UPM8 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP4E1Q9UPM8 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP4E1Q9UPM8 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP4E1Q9UPM8 FER1L4-210ENST00000615531 5998 ntBASIC16.73■□□□□ 0.27
AP4E1Q9UPM8 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
AP4E1Q9UPM8 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP4E1Q9UPM8 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
AP4E1Q9UPM8 AP005117.1-202ENST00000581724 1908 ntBASIC16.73■□□□□ 0.27
AP4E1Q9UPM8 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP4E1Q9UPM8 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
AP4E1Q9UPM8 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP4E1Q9UPM8 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
AP4E1Q9UPM8 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
AP4E1Q9UPM8 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC16.73■□□□□ 0.27
AP4E1Q9UPM8 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC16.73■□□□□ 0.27
AP4E1Q9UPM8 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.73■□□□□ 0.27
AP4E1Q9UPM8 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.73■□□□□ 0.27
AP4E1Q9UPM8 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.73■□□□□ 0.27
AP4E1Q9UPM8 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.73■□□□□ 0.27
AP4E1Q9UPM8 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC16.73■□□□□ 0.27
AP4E1Q9UPM8 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.73■□□□□ 0.27
AP4E1Q9UPM8 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
AP4E1Q9UPM8 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP4E1Q9UPM8 AC243562.2-201ENST00000561247 970 ntBASIC16.73■□□□□ 0.27
AP4E1Q9UPM8 SNHG9-202ENST00000564014 471 ntBASIC16.73■□□□□ 0.27
AP4E1Q9UPM8 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.73■□□□□ 0.27
AP4E1Q9UPM8 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.73■□□□□ 0.27
AP4E1Q9UPM8 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.73■□□□□ 0.27
AP4E1Q9UPM8 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.73■□□□□ 0.27
AP4E1Q9UPM8 AL596442.2-201ENST00000610240 980 ntBASIC16.73■□□□□ 0.27
AP4E1Q9UPM8 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
AP4E1Q9UPM8 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP4E1Q9UPM8 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.73■□□□□ 0.27
AP4E1Q9UPM8 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP4E1Q9UPM8 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC16.73■□□□□ 0.27
AP4E1Q9UPM8 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP4E1Q9UPM8 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP4E1Q9UPM8 GOLGA6L17P-202ENST00000614358 1398 ntBASIC16.73■□□□□ 0.27
AP4E1Q9UPM8 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.73■□□□□ 0.27
AP4E1Q9UPM8 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP4E1Q9UPM8 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP4E1Q9UPM8 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.73■□□□□ 0.27
AP4E1Q9UPM8 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP4E1Q9UPM8 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP4E1Q9UPM8 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.73■□□□□ 0.27
AP4E1Q9UPM8 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
AP4E1Q9UPM8 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
AP4E1Q9UPM8 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP4E1Q9UPM8 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP4E1Q9UPM8 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.73■□□□□ 0.27
AP4E1Q9UPM8 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.73■□□□□ 0.27
AP4E1Q9UPM8 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms