Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
DUX4Q9UBX2 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
DUX4Q9UBX2 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
DUX4Q9UBX2 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
DUX4Q9UBX2 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
DUX4Q9UBX2 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
DUX4Q9UBX2 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
DUX4Q9UBX2 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
DUX4Q9UBX2 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
DUX4Q9UBX2 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.29□□□□□ -0.12
DUX4Q9UBX2 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
DUX4Q9UBX2 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
DUX4Q9UBX2 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
DUX4Q9UBX2 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
DUX4Q9UBX2 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
DUX4Q9UBX2 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC14.29□□□□□ -0.12
DUX4Q9UBX2 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
DUX4Q9UBX2 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC14.29□□□□□ -0.12
DUX4Q9UBX2 NABP1-203ENST00000409510 843 ntTSL 5 BASIC14.29□□□□□ -0.12
DUX4Q9UBX2 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC14.29□□□□□ -0.12
DUX4Q9UBX2 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC14.29□□□□□ -0.12
DUX4Q9UBX2 RPS15P9-201ENST00000494093 319 ntBASIC14.29□□□□□ -0.12
DUX4Q9UBX2 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
DUX4Q9UBX2 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC14.29□□□□□ -0.12
DUX4Q9UBX2 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC14.29□□□□□ -0.12
DUX4Q9UBX2 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC14.29□□□□□ -0.12
DUX4Q9UBX2 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
DUX4Q9UBX2 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.29□□□□□ -0.12
DUX4Q9UBX2 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
DUX4Q9UBX2 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
DUX4Q9UBX2 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
DUX4Q9UBX2 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
DUX4Q9UBX2 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
DUX4Q9UBX2 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
DUX4Q9UBX2 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC14.29□□□□□ -0.12
DUX4Q9UBX2 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.29□□□□□ -0.12
DUX4Q9UBX2 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
DUX4Q9UBX2 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
DUX4Q9UBX2 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
DUX4Q9UBX2 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
DUX4Q9UBX2 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
DUX4Q9UBX2 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
DUX4Q9UBX2 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
DUX4Q9UBX2 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
DUX4Q9UBX2 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
DUX4Q9UBX2 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
DUX4Q9UBX2 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
DUX4Q9UBX2 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
DUX4Q9UBX2 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
DUX4Q9UBX2 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
DUX4Q9UBX2 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
DUX4Q9UBX2 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
DUX4Q9UBX2 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
DUX4Q9UBX2 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC14.28□□□□□ -0.12
DUX4Q9UBX2 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
DUX4Q9UBX2 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
DUX4Q9UBX2 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
DUX4Q9UBX2 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC14.28□□□□□ -0.12
DUX4Q9UBX2 IL9RP2-201ENST00000423948 1312 ntBASIC14.28□□□□□ -0.12
DUX4Q9UBX2 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
DUX4Q9UBX2 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.28□□□□□ -0.12
DUX4Q9UBX2 FRMD8P1-201ENST00000440433 1524 ntBASIC14.28□□□□□ -0.12
DUX4Q9UBX2 AC093909.1-201ENST00000504731 1122 ntBASIC14.28□□□□□ -0.12
DUX4Q9UBX2 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC14.28□□□□□ -0.12
DUX4Q9UBX2 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.28□□□□□ -0.12
DUX4Q9UBX2 STX3-203ENST00000529177 1571 ntTSL 2 BASIC14.28□□□□□ -0.12
DUX4Q9UBX2 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC14.28□□□□□ -0.12
DUX4Q9UBX2 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
DUX4Q9UBX2 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC14.28□□□□□ -0.12
DUX4Q9UBX2 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC14.28□□□□□ -0.12
DUX4Q9UBX2 AC120114.3-201ENST00000611923 658 ntBASIC14.28□□□□□ -0.12
DUX4Q9UBX2 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
DUX4Q9UBX2 MIR1199-201ENST00000621445 119 ntBASIC14.28□□□□□ -0.12
DUX4Q9UBX2 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
DUX4Q9UBX2 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.28□□□□□ -0.12
DUX4Q9UBX2 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC14.28□□□□□ -0.12
DUX4Q9UBX2 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
DUX4Q9UBX2 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
DUX4Q9UBX2 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
DUX4Q9UBX2 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
DUX4Q9UBX2 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
DUX4Q9UBX2 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
DUX4Q9UBX2 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.28□□□□□ -0.12
DUX4Q9UBX2 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
DUX4Q9UBX2 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
DUX4Q9UBX2 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
DUX4Q9UBX2 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC14.27□□□□□ -0.12
DUX4Q9UBX2 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.27□□□□□ -0.12
DUX4Q9UBX2 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.27□□□□□ -0.12
DUX4Q9UBX2 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
DUX4Q9UBX2 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
DUX4Q9UBX2 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
DUX4Q9UBX2 PI4KAP1-204ENST00000612579 1703 ntBASIC14.27□□□□□ -0.12
DUX4Q9UBX2 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
DUX4Q9UBX2 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
DUX4Q9UBX2 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
DUX4Q9UBX2 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC14.27□□□□□ -0.12
DUX4Q9UBX2 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
DUX4Q9UBX2 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC14.27□□□□□ -0.12
DUX4Q9UBX2 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms