Protein–RNA interactions for Protein: Q9NWD8

TMEM248, Transmembrane protein 248, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248Q9NWD8 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.4■□□□□ 0.22
TMEM248Q9NWD8 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TMEM248Q9NWD8 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
TMEM248Q9NWD8 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TMEM248Q9NWD8 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
TMEM248Q9NWD8 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TMEM248Q9NWD8 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TMEM248Q9NWD8 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.4■□□□□ 0.22
TMEM248Q9NWD8 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TMEM248Q9NWD8 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TMEM248Q9NWD8 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TMEM248Q9NWD8 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TMEM248Q9NWD8 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.4■□□□□ 0.22
TMEM248Q9NWD8 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC16.4■□□□□ 0.22
TMEM248Q9NWD8 BASP1P1-201ENST00000430708 665 ntBASIC16.4■□□□□ 0.22
TMEM248Q9NWD8 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.4■□□□□ 0.22
TMEM248Q9NWD8 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.4■□□□□ 0.22
TMEM248Q9NWD8 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC16.4■□□□□ 0.22
TMEM248Q9NWD8 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
TMEM248Q9NWD8 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.4■□□□□ 0.22
TMEM248Q9NWD8 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC16.4■□□□□ 0.22
TMEM248Q9NWD8 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16.4■□□□□ 0.22
TMEM248Q9NWD8 AC093214.1-201ENST00000511688 1107 ntBASIC16.4■□□□□ 0.22
TMEM248Q9NWD8 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC16.4■□□□□ 0.22
TMEM248Q9NWD8 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC16.4■□□□□ 0.22
TMEM248Q9NWD8 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC16.4■□□□□ 0.22
TMEM248Q9NWD8 AL512361.1-201ENST00000554200 418 ntBASIC16.4■□□□□ 0.22
TMEM248Q9NWD8 AC010336.2-201ENST00000564226 506 ntBASIC16.4■□□□□ 0.22
TMEM248Q9NWD8 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC16.4■□□□□ 0.22
TMEM248Q9NWD8 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.4■□□□□ 0.22
TMEM248Q9NWD8 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.4■□□□□ 0.22
TMEM248Q9NWD8 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC16.4■□□□□ 0.22
TMEM248Q9NWD8 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.4■□□□□ 0.22
TMEM248Q9NWD8 AL450472.2-201ENST00000603663 1156 ntBASIC16.4■□□□□ 0.22
TMEM248Q9NWD8 AL844908.2-201ENST00000609461 460 ntBASIC16.4■□□□□ 0.22
TMEM248Q9NWD8 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TMEM248Q9NWD8 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC16.4■□□□□ 0.22
TMEM248Q9NWD8 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TMEM248Q9NWD8 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
TMEM248Q9NWD8 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
TMEM248Q9NWD8 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TMEM248Q9NWD8 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TMEM248Q9NWD8 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TMEM248Q9NWD8 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
TMEM248Q9NWD8 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.4■□□□□ 0.22
TMEM248Q9NWD8 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TMEM248Q9NWD8 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
TMEM248Q9NWD8 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TMEM248Q9NWD8 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
TMEM248Q9NWD8 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
TMEM248Q9NWD8 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.4■□□□□ 0.22
TMEM248Q9NWD8 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.4■□□□□ 0.22
TMEM248Q9NWD8 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.22
TMEM248Q9NWD8 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
TMEM248Q9NWD8 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
TMEM248Q9NWD8 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
TMEM248Q9NWD8 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM248Q9NWD8 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM248Q9NWD8 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.39■□□□□ 0.21
TMEM248Q9NWD8 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.39■□□□□ 0.21
TMEM248Q9NWD8 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
TMEM248Q9NWD8 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM248Q9NWD8 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
TMEM248Q9NWD8 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM248Q9NWD8 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM248Q9NWD8 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM248Q9NWD8 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM248Q9NWD8 MIR770-201ENST00000390219 98 ntBASIC16.39■□□□□ 0.21
TMEM248Q9NWD8 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC16.39■□□□□ 0.21
TMEM248Q9NWD8 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC16.39■□□□□ 0.21
TMEM248Q9NWD8 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.39■□□□□ 0.21
TMEM248Q9NWD8 RN7SL618P-201ENST00000477850 296 ntBASIC16.39■□□□□ 0.21
TMEM248Q9NWD8 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.39■□□□□ 0.21
TMEM248Q9NWD8 ZNF890P-202ENST00000530367 1156 ntBASIC16.39■□□□□ 0.21
TMEM248Q9NWD8 AQP6-203ENST00000551733 849 ntTSL 3 BASIC16.39■□□□□ 0.21
TMEM248Q9NWD8 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
TMEM248Q9NWD8 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16.39■□□□□ 0.21
TMEM248Q9NWD8 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM248Q9NWD8 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM248Q9NWD8 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.39■□□□□ 0.21
TMEM248Q9NWD8 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.39■□□□□ 0.21
TMEM248Q9NWD8 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM248Q9NWD8 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM248Q9NWD8 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM248Q9NWD8 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM248Q9NWD8 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM248Q9NWD8 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
TMEM248Q9NWD8 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM248Q9NWD8 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.39■□□□□ 0.21
TMEM248Q9NWD8 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM248Q9NWD8 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM248Q9NWD8 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM248Q9NWD8 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
TMEM248Q9NWD8 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC16.38■□□□□ 0.21
TMEM248Q9NWD8 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.38■□□□□ 0.21
TMEM248Q9NWD8 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
TMEM248Q9NWD8 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TMEM248Q9NWD8 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.38■□□□□ 0.21
TMEM248Q9NWD8 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
TMEM248Q9NWD8 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms