Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC13.49□□□□□ -0.25
LIN7CQ9NUP9 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC13.49□□□□□ -0.25
LIN7CQ9NUP9 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LIN7CQ9NUP9 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LIN7CQ9NUP9 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LIN7CQ9NUP9 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
LIN7CQ9NUP9 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC13.49□□□□□ -0.25
LIN7CQ9NUP9 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LIN7CQ9NUP9 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LIN7CQ9NUP9 AL592424.1-201ENST00000563624 1536 ntBASIC13.49□□□□□ -0.25
LIN7CQ9NUP9 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC13.49□□□□□ -0.25
LIN7CQ9NUP9 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LIN7CQ9NUP9 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LIN7CQ9NUP9 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LIN7CQ9NUP9 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LIN7CQ9NUP9 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC13.48□□□□□ -0.25
LIN7CQ9NUP9 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
LIN7CQ9NUP9 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
LIN7CQ9NUP9 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
LIN7CQ9NUP9 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC13.48□□□□□ -0.25
LIN7CQ9NUP9 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
LIN7CQ9NUP9 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LIN7CQ9NUP9 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC13.48□□□□□ -0.25
LIN7CQ9NUP9 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC13.48□□□□□ -0.25
LIN7CQ9NUP9 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LIN7CQ9NUP9 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC13.48□□□□□ -0.25
LIN7CQ9NUP9 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
LIN7CQ9NUP9 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LIN7CQ9NUP9 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
LIN7CQ9NUP9 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
LIN7CQ9NUP9 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
LIN7CQ9NUP9 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LIN7CQ9NUP9 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
LIN7CQ9NUP9 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC13.48□□□□□ -0.25
LIN7CQ9NUP9 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
LIN7CQ9NUP9 MED15P5-201ENST00000423150 992 ntBASIC13.48□□□□□ -0.25
LIN7CQ9NUP9 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC13.48□□□□□ -0.25
LIN7CQ9NUP9 RNA5SP416-201ENST00000516838 111 ntBASIC13.48□□□□□ -0.25
LIN7CQ9NUP9 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC13.48□□□□□ -0.25
LIN7CQ9NUP9 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC13.48□□□□□ -0.25
LIN7CQ9NUP9 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC13.48□□□□□ -0.25
LIN7CQ9NUP9 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC13.48□□□□□ -0.25
LIN7CQ9NUP9 AC064836.3-201ENST00000607928 673 ntBASIC13.48□□□□□ -0.25
LIN7CQ9NUP9 WT1-AS_2.1-201ENST00000613208 137 ntBASIC13.48□□□□□ -0.25
LIN7CQ9NUP9 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
LIN7CQ9NUP9 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LIN7CQ9NUP9 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
LIN7CQ9NUP9 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC13.48□□□□□ -0.25
LIN7CQ9NUP9 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LIN7CQ9NUP9 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC13.48□□□□□ -0.25
LIN7CQ9NUP9 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC13.48□□□□□ -0.25
LIN7CQ9NUP9 U82695.1-201ENST00000635752 1889 ntBASIC13.48□□□□□ -0.25
LIN7CQ9NUP9 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC13.48□□□□□ -0.25
LIN7CQ9NUP9 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC13.48□□□□□ -0.25
LIN7CQ9NUP9 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
LIN7CQ9NUP9 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
LIN7CQ9NUP9 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC13.48□□□□□ -0.25
LIN7CQ9NUP9 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LIN7CQ9NUP9 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC13.48□□□□□ -0.25
LIN7CQ9NUP9 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC13.48□□□□□ -0.25
LIN7CQ9NUP9 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LIN7CQ9NUP9 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LIN7CQ9NUP9 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC13.48□□□□□ -0.25
LIN7CQ9NUP9 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LIN7CQ9NUP9 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
LIN7CQ9NUP9 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LIN7CQ9NUP9 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
LIN7CQ9NUP9 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC13.47□□□□□ -0.25
LIN7CQ9NUP9 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
LIN7CQ9NUP9 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC13.47□□□□□ -0.25
LIN7CQ9NUP9 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC13.47□□□□□ -0.25
LIN7CQ9NUP9 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
LIN7CQ9NUP9 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LIN7CQ9NUP9 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC13.47□□□□□ -0.25
LIN7CQ9NUP9 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
LIN7CQ9NUP9 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LIN7CQ9NUP9 MYO15B-237ENST00000642007 4893 ntBASIC13.47□□□□□ -0.25
LIN7CQ9NUP9 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
LIN7CQ9NUP9 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LIN7CQ9NUP9 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
LIN7CQ9NUP9 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC13.47□□□□□ -0.25
LIN7CQ9NUP9 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
LIN7CQ9NUP9 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC13.47□□□□□ -0.25
LIN7CQ9NUP9 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC13.47□□□□□ -0.25
LIN7CQ9NUP9 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
LIN7CQ9NUP9 PRAL-201ENST00000624952 3286 ntBASIC13.47□□□□□ -0.25
LIN7CQ9NUP9 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LIN7CQ9NUP9 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC13.47□□□□□ -0.25
LIN7CQ9NUP9 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LIN7CQ9NUP9 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
LIN7CQ9NUP9 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC13.47□□□□□ -0.25
LIN7CQ9NUP9 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC13.47□□□□□ -0.25
LIN7CQ9NUP9 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC13.47□□□□□ -0.25
LIN7CQ9NUP9 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
LIN7CQ9NUP9 HCG4B-203ENST00000450128 991 ntBASIC13.47□□□□□ -0.25
LIN7CQ9NUP9 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC13.47□□□□□ -0.25
LIN7CQ9NUP9 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC13.47□□□□□ -0.25
LIN7CQ9NUP9 CXCL1P1-201ENST00000502804 216 ntBASIC13.47□□□□□ -0.25
LIN7CQ9NUP9 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC13.47□□□□□ -0.25
LIN7CQ9NUP9 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms