Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 FLII-221ENST00000578558 2377 ntTSL 5 BASIC17.86■□□□□ 0.45
BLOC1S4Q9NUP1 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
BLOC1S4Q9NUP1 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
BLOC1S4Q9NUP1 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
BLOC1S4Q9NUP1 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
BLOC1S4Q9NUP1 AZGP1P1-201ENST00000411909 902 ntBASIC17.86■□□□□ 0.45
BLOC1S4Q9NUP1 SATB1-217ENST00000493952 626 ntTSL 3 BASIC17.86■□□□□ 0.45
BLOC1S4Q9NUP1 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
BLOC1S4Q9NUP1 RPL28-205ENST00000558131 444 ntTSL 5 BASIC17.86■□□□□ 0.45
BLOC1S4Q9NUP1 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
BLOC1S4Q9NUP1 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
BLOC1S4Q9NUP1 AL035456.1-201ENST00000456064 1369 ntBASIC17.86■□□□□ 0.45
BLOC1S4Q9NUP1 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
BLOC1S4Q9NUP1 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
BLOC1S4Q9NUP1 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC17.86■□□□□ 0.45
BLOC1S4Q9NUP1 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
BLOC1S4Q9NUP1 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
BLOC1S4Q9NUP1 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
BLOC1S4Q9NUP1 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
BLOC1S4Q9NUP1 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
BLOC1S4Q9NUP1 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC17.86■□□□□ 0.45
BLOC1S4Q9NUP1 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
BLOC1S4Q9NUP1 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC17.86■□□□□ 0.45
BLOC1S4Q9NUP1 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC17.86■□□□□ 0.45
BLOC1S4Q9NUP1 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC17.86■□□□□ 0.45
BLOC1S4Q9NUP1 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
BLOC1S4Q9NUP1 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
BLOC1S4Q9NUP1 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
BLOC1S4Q9NUP1 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.85■□□□□ 0.45
BLOC1S4Q9NUP1 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
BLOC1S4Q9NUP1 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
BLOC1S4Q9NUP1 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
BLOC1S4Q9NUP1 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
BLOC1S4Q9NUP1 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
BLOC1S4Q9NUP1 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
BLOC1S4Q9NUP1 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC17.85■□□□□ 0.45
BLOC1S4Q9NUP1 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC17.85■□□□□ 0.45
BLOC1S4Q9NUP1 CICP13-201ENST00000422015 2789 ntBASIC17.85■□□□□ 0.45
BLOC1S4Q9NUP1 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC17.85■□□□□ 0.45
BLOC1S4Q9NUP1 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
BLOC1S4Q9NUP1 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
BLOC1S4Q9NUP1 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC17.85■□□□□ 0.45
BLOC1S4Q9NUP1 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
BLOC1S4Q9NUP1 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
BLOC1S4Q9NUP1 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC17.85■□□□□ 0.45
BLOC1S4Q9NUP1 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
BLOC1S4Q9NUP1 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
BLOC1S4Q9NUP1 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
BLOC1S4Q9NUP1 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC17.85■□□□□ 0.45
BLOC1S4Q9NUP1 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
BLOC1S4Q9NUP1 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
BLOC1S4Q9NUP1 AC093028.1-201ENST00000622998 982 ntBASIC17.85■□□□□ 0.45
BLOC1S4Q9NUP1 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
BLOC1S4Q9NUP1 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
BLOC1S4Q9NUP1 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
BLOC1S4Q9NUP1 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
BLOC1S4Q9NUP1 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.85■□□□□ 0.45
BLOC1S4Q9NUP1 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
BLOC1S4Q9NUP1 AL162727.3-201ENST00000635661 2787 ntBASIC17.85■□□□□ 0.45
BLOC1S4Q9NUP1 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
BLOC1S4Q9NUP1 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
BLOC1S4Q9NUP1 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC17.84■□□□□ 0.45
BLOC1S4Q9NUP1 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC17.84■□□□□ 0.45
BLOC1S4Q9NUP1 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
BLOC1S4Q9NUP1 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
BLOC1S4Q9NUP1 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
BLOC1S4Q9NUP1 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
BLOC1S4Q9NUP1 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
BLOC1S4Q9NUP1 HNRNPFP1-201ENST00000391730 1133 ntBASIC17.84■□□□□ 0.45
BLOC1S4Q9NUP1 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC17.84■□□□□ 0.45
BLOC1S4Q9NUP1 MTND6P24-201ENST00000440466 518 ntBASIC17.84■□□□□ 0.45
BLOC1S4Q9NUP1 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC17.84■□□□□ 0.45
BLOC1S4Q9NUP1 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
BLOC1S4Q9NUP1 PHKG1P2-201ENST00000457537 863 ntBASIC17.84■□□□□ 0.45
BLOC1S4Q9NUP1 MDH2-205ENST00000461263 648 ntTSL 2 BASIC17.84■□□□□ 0.45
BLOC1S4Q9NUP1 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC17.84■□□□□ 0.45
BLOC1S4Q9NUP1 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC17.84■□□□□ 0.45
BLOC1S4Q9NUP1 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC17.84■□□□□ 0.45
BLOC1S4Q9NUP1 HNRNPUP1-201ENST00000554987 333 ntBASIC17.84■□□□□ 0.45
BLOC1S4Q9NUP1 AL079307.3-201ENST00000556114 283 ntBASIC17.84■□□□□ 0.45
BLOC1S4Q9NUP1 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC17.84■□□□□ 0.45
BLOC1S4Q9NUP1 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC17.84■□□□□ 0.45
BLOC1S4Q9NUP1 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC17.84■□□□□ 0.45
BLOC1S4Q9NUP1 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC17.84■□□□□ 0.45
BLOC1S4Q9NUP1 AC097359.3-201ENST00000603982 1210 ntBASIC17.84■□□□□ 0.45
BLOC1S4Q9NUP1 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
BLOC1S4Q9NUP1 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC17.84■□□□□ 0.45
BLOC1S4Q9NUP1 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
BLOC1S4Q9NUP1 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
BLOC1S4Q9NUP1 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC17.84■□□□□ 0.45
BLOC1S4Q9NUP1 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
BLOC1S4Q9NUP1 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
BLOC1S4Q9NUP1 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.84■□□□□ 0.45
BLOC1S4Q9NUP1 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
BLOC1S4Q9NUP1 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
BLOC1S4Q9NUP1 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC17.83■□□□□ 0.45
BLOC1S4Q9NUP1 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC17.83■□□□□ 0.45
BLOC1S4Q9NUP1 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
BLOC1S4Q9NUP1 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
BLOC1S4Q9NUP1 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC17.83■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms