Protein–RNA interactions for Protein: Q9NSC5

HOMER3, Homer protein homolog 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3Q9NSC5 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HOMER3Q9NSC5 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.86■□□□□ 0.29
HOMER3Q9NSC5 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
HOMER3Q9NSC5 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC16.86■□□□□ 0.29
HOMER3Q9NSC5 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
HOMER3Q9NSC5 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.86■□□□□ 0.29
HOMER3Q9NSC5 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HOMER3Q9NSC5 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.86■□□□□ 0.29
HOMER3Q9NSC5 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HOMER3Q9NSC5 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HOMER3Q9NSC5 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
HOMER3Q9NSC5 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
HOMER3Q9NSC5 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.86■□□□□ 0.29
HOMER3Q9NSC5 MED22-202ENST00000371999 987 ntTSL 3 BASIC16.86■□□□□ 0.29
HOMER3Q9NSC5 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.86■□□□□ 0.29
HOMER3Q9NSC5 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.86■□□□□ 0.29
HOMER3Q9NSC5 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
HOMER3Q9NSC5 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC16.86■□□□□ 0.29
HOMER3Q9NSC5 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.86■□□□□ 0.29
HOMER3Q9NSC5 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.86■□□□□ 0.29
HOMER3Q9NSC5 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16.86■□□□□ 0.29
HOMER3Q9NSC5 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.86■□□□□ 0.29
HOMER3Q9NSC5 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.86■□□□□ 0.29
HOMER3Q9NSC5 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.86■□□□□ 0.29
HOMER3Q9NSC5 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.86■□□□□ 0.29
HOMER3Q9NSC5 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HOMER3Q9NSC5 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HOMER3Q9NSC5 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
HOMER3Q9NSC5 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HOMER3Q9NSC5 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HOMER3Q9NSC5 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HOMER3Q9NSC5 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HOMER3Q9NSC5 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
HOMER3Q9NSC5 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.86■□□□□ 0.29
HOMER3Q9NSC5 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
HOMER3Q9NSC5 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
HOMER3Q9NSC5 AC020658.6-201ENST00000623564 1870 ntBASIC16.86■□□□□ 0.29
HOMER3Q9NSC5 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HOMER3Q9NSC5 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
HOMER3Q9NSC5 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HOMER3Q9NSC5 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
HOMER3Q9NSC5 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
HOMER3Q9NSC5 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HOMER3Q9NSC5 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HOMER3Q9NSC5 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
HOMER3Q9NSC5 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
HOMER3Q9NSC5 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.85■□□□□ 0.29
HOMER3Q9NSC5 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
HOMER3Q9NSC5 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
HOMER3Q9NSC5 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HOMER3Q9NSC5 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.85■□□□□ 0.29
HOMER3Q9NSC5 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
HOMER3Q9NSC5 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.85■□□□□ 0.29
HOMER3Q9NSC5 MIR4751-201ENST00000578027 74 ntBASIC16.85■□□□□ 0.29
HOMER3Q9NSC5 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.85■□□□□ 0.29
HOMER3Q9NSC5 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HOMER3Q9NSC5 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.85■□□□□ 0.29
HOMER3Q9NSC5 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
HOMER3Q9NSC5 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.85■□□□□ 0.29
HOMER3Q9NSC5 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HOMER3Q9NSC5 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
HOMER3Q9NSC5 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HOMER3Q9NSC5 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
HOMER3Q9NSC5 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
HOMER3Q9NSC5 TMBIM7P-203ENST00000641617 1718 ntBASIC16.84■□□□□ 0.29
HOMER3Q9NSC5 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HOMER3Q9NSC5 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
HOMER3Q9NSC5 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.84■□□□□ 0.29
HOMER3Q9NSC5 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.84■□□□□ 0.29
HOMER3Q9NSC5 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HOMER3Q9NSC5 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
HOMER3Q9NSC5 GOLGA8DP-202ENST00000341390 2184 ntBASIC16.84■□□□□ 0.29
HOMER3Q9NSC5 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC16.84■□□□□ 0.29
HOMER3Q9NSC5 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC16.84■□□□□ 0.29
HOMER3Q9NSC5 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HOMER3Q9NSC5 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HOMER3Q9NSC5 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.84■□□□□ 0.29
HOMER3Q9NSC5 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.84■□□□□ 0.29
HOMER3Q9NSC5 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HOMER3Q9NSC5 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.84■□□□□ 0.29
HOMER3Q9NSC5 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.84■□□□□ 0.29
HOMER3Q9NSC5 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.84■□□□□ 0.29
HOMER3Q9NSC5 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.84■□□□□ 0.29
HOMER3Q9NSC5 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
HOMER3Q9NSC5 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.84■□□□□ 0.29
HOMER3Q9NSC5 AC108751.1-201ENST00000490852 363 ntBASIC16.84■□□□□ 0.29
HOMER3Q9NSC5 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC16.84■□□□□ 0.29
HOMER3Q9NSC5 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.84■□□□□ 0.29
HOMER3Q9NSC5 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.84■□□□□ 0.29
HOMER3Q9NSC5 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.84■□□□□ 0.29
HOMER3Q9NSC5 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.84■□□□□ 0.29
HOMER3Q9NSC5 AC117500.6-201ENST00000624871 588 ntBASIC16.84■□□□□ 0.29
HOMER3Q9NSC5 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.84■□□□□ 0.29
HOMER3Q9NSC5 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC16.84■□□□□ 0.29
HOMER3Q9NSC5 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HOMER3Q9NSC5 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
HOMER3Q9NSC5 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HOMER3Q9NSC5 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.84■□□□□ 0.29
HOMER3Q9NSC5 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HOMER3Q9NSC5 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms