Protein–RNA interactions for Protein: Q9HC36

MRM3, rRNA methyltransferase 3, mitochondrial, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRM3Q9HC36 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MRM3Q9HC36 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
MRM3Q9HC36 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MRM3Q9HC36 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
MRM3Q9HC36 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.12■□□□□ 0.17
MRM3Q9HC36 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MRM3Q9HC36 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
MRM3Q9HC36 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
MRM3Q9HC36 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
MRM3Q9HC36 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
MRM3Q9HC36 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
MRM3Q9HC36 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
MRM3Q9HC36 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
MRM3Q9HC36 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MRM3Q9HC36 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MRM3Q9HC36 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.11■□□□□ 0.17
MRM3Q9HC36 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.11■□□□□ 0.17
MRM3Q9HC36 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
MRM3Q9HC36 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MRM3Q9HC36 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.11■□□□□ 0.17
MRM3Q9HC36 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
MRM3Q9HC36 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
MRM3Q9HC36 AL592309.1-201ENST00000443127 649 ntBASIC16.11■□□□□ 0.17
MRM3Q9HC36 AL139010.1-201ENST00000454878 894 ntBASIC16.11■□□□□ 0.17
MRM3Q9HC36 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.11■□□□□ 0.17
MRM3Q9HC36 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.11■□□□□ 0.17
MRM3Q9HC36 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.11■□□□□ 0.17
MRM3Q9HC36 AL691403.2-201ENST00000618460 490 ntBASIC16.11■□□□□ 0.17
MRM3Q9HC36 AC055717.3-201ENST00000622967 595 ntBASIC16.11■□□□□ 0.17
MRM3Q9HC36 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
MRM3Q9HC36 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16.11■□□□□ 0.17
MRM3Q9HC36 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
MRM3Q9HC36 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
MRM3Q9HC36 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
MRM3Q9HC36 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.11■□□□□ 0.17
MRM3Q9HC36 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.11■□□□□ 0.17
MRM3Q9HC36 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MRM3Q9HC36 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MRM3Q9HC36 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
MRM3Q9HC36 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MRM3Q9HC36 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
MRM3Q9HC36 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
MRM3Q9HC36 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MRM3Q9HC36 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
MRM3Q9HC36 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
MRM3Q9HC36 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.1■□□□□ 0.17
MRM3Q9HC36 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
MRM3Q9HC36 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
MRM3Q9HC36 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
MRM3Q9HC36 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
MRM3Q9HC36 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
MRM3Q9HC36 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MRM3Q9HC36 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
MRM3Q9HC36 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.1■□□□□ 0.17
MRM3Q9HC36 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
MRM3Q9HC36 AP3S2-216ENST00000617003 1561 ntBASIC16.1■□□□□ 0.17
MRM3Q9HC36 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MRM3Q9HC36 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MRM3Q9HC36 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MRM3Q9HC36 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
MRM3Q9HC36 AC112482.1-201ENST00000492080 688 ntBASIC16.1■□□□□ 0.17
MRM3Q9HC36 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
MRM3Q9HC36 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
MRM3Q9HC36 DHDH-204ENST00000523250 634 ntTSL 5 BASIC16.1■□□□□ 0.17
MRM3Q9HC36 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC16.1■□□□□ 0.17
MRM3Q9HC36 SLC25A39P2-201ENST00000537614 270 ntBASIC16.1■□□□□ 0.17
MRM3Q9HC36 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC16.1■□□□□ 0.17
MRM3Q9HC36 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.1■□□□□ 0.17
MRM3Q9HC36 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.1■□□□□ 0.17
MRM3Q9HC36 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
MRM3Q9HC36 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.1■□□□□ 0.17
MRM3Q9HC36 AC026979.3-201ENST00000607315 403 ntBASIC16.1■□□□□ 0.17
MRM3Q9HC36 AC105339.1-204ENST00000636249 355 ntBASIC16.1■□□□□ 0.17
MRM3Q9HC36 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
MRM3Q9HC36 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MRM3Q9HC36 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MRM3Q9HC36 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MRM3Q9HC36 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MRM3Q9HC36 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MRM3Q9HC36 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.1■□□□□ 0.17
MRM3Q9HC36 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
MRM3Q9HC36 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
MRM3Q9HC36 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC16.1■□□□□ 0.17
MRM3Q9HC36 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.1■□□□□ 0.17
MRM3Q9HC36 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.1■□□□□ 0.17
MRM3Q9HC36 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.1■□□□□ 0.17
MRM3Q9HC36 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MRM3Q9HC36 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC16.1■□□□□ 0.17
MRM3Q9HC36 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MRM3Q9HC36 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.09■□□□□ 0.17
MRM3Q9HC36 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.09■□□□□ 0.17
MRM3Q9HC36 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.09■□□□□ 0.17
MRM3Q9HC36 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MRM3Q9HC36 FLII-221ENST00000578558 2377 ntTSL 5 BASIC16.09■□□□□ 0.17
MRM3Q9HC36 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.09■□□□□ 0.17
MRM3Q9HC36 UXT-AS1-201ENST00000590504 1525 ntBASIC16.09■□□□□ 0.17
MRM3Q9HC36 REXO1L1P-202ENST00000608646 1974 ntBASIC16.09■□□□□ 0.17
MRM3Q9HC36 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.09■□□□□ 0.17
MRM3Q9HC36 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MRM3Q9HC36 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms