Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
RTFDC1Q9BY42 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RTFDC1Q9BY42 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC19.36■□□□□ 0.69
RTFDC1Q9BY42 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
RTFDC1Q9BY42 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC19.35■□□□□ 0.69
RTFDC1Q9BY42 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RTFDC1Q9BY42 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC19.35■□□□□ 0.69
RTFDC1Q9BY42 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RTFDC1Q9BY42 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.35■□□□□ 0.69
RTFDC1Q9BY42 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
RTFDC1Q9BY42 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RTFDC1Q9BY42 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC19.35■□□□□ 0.69
RTFDC1Q9BY42 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RTFDC1Q9BY42 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RTFDC1Q9BY42 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RTFDC1Q9BY42 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
RTFDC1Q9BY42 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RTFDC1Q9BY42 ACKR1-201ENST00000368121 1240 ntBASIC19.35■□□□□ 0.69
RTFDC1Q9BY42 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RTFDC1Q9BY42 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RTFDC1Q9BY42 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC19.35■□□□□ 0.69
RTFDC1Q9BY42 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RTFDC1Q9BY42 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC19.35■□□□□ 0.69
RTFDC1Q9BY42 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC19.35■□□□□ 0.69
RTFDC1Q9BY42 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC19.35■□□□□ 0.69
RTFDC1Q9BY42 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC19.35■□□□□ 0.69
RTFDC1Q9BY42 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
RTFDC1Q9BY42 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC19.35■□□□□ 0.69
RTFDC1Q9BY42 AC010328.2-201ENST00000597698 1111 ntBASIC19.35■□□□□ 0.69
RTFDC1Q9BY42 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC19.35■□□□□ 0.69
RTFDC1Q9BY42 METTL26-214ENST00000614890 801 ntTSL 3 BASIC19.35■□□□□ 0.69
RTFDC1Q9BY42 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC19.35■□□□□ 0.69
RTFDC1Q9BY42 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
RTFDC1Q9BY42 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RTFDC1Q9BY42 AC005052.1-201ENST00000625181 2492 ntBASIC19.35■□□□□ 0.69
RTFDC1Q9BY42 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RTFDC1Q9BY42 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.35■□□□□ 0.69
RTFDC1Q9BY42 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RTFDC1Q9BY42 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RTFDC1Q9BY42 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
RTFDC1Q9BY42 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RTFDC1Q9BY42 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RTFDC1Q9BY42 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC19.34■□□□□ 0.69
RTFDC1Q9BY42 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RTFDC1Q9BY42 FLJ38576-201ENST00000623820 2459 ntBASIC19.34■□□□□ 0.69
RTFDC1Q9BY42 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RTFDC1Q9BY42 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RTFDC1Q9BY42 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC19.34■□□□□ 0.69
RTFDC1Q9BY42 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC19.34■□□□□ 0.69
RTFDC1Q9BY42 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RTFDC1Q9BY42 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RTFDC1Q9BY42 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RTFDC1Q9BY42 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RTFDC1Q9BY42 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RTFDC1Q9BY42 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
RTFDC1Q9BY42 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RTFDC1Q9BY42 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.34■□□□□ 0.69
RTFDC1Q9BY42 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC19.34■□□□□ 0.69
RTFDC1Q9BY42 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RTFDC1Q9BY42 TPO-206ENST00000382269 1155 ntTSL 5 BASIC19.34■□□□□ 0.69
RTFDC1Q9BY42 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
RTFDC1Q9BY42 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC19.34■□□□□ 0.69
RTFDC1Q9BY42 RPL13AP20-201ENST00000459725 609 ntBASIC19.34■□□□□ 0.69
RTFDC1Q9BY42 TPI1-206ENST00000488464 791 ntTSL 5 BASIC19.34■□□□□ 0.69
RTFDC1Q9BY42 AC022137.2-201ENST00000503482 481 ntBASIC19.34■□□□□ 0.69
RTFDC1Q9BY42 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC19.34■□□□□ 0.69
RTFDC1Q9BY42 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RTFDC1Q9BY42 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC19.34■□□□□ 0.69
RTFDC1Q9BY42 HNRNPUP1-201ENST00000554987 333 ntBASIC19.34■□□□□ 0.69
RTFDC1Q9BY42 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RTFDC1Q9BY42 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC19.34■□□□□ 0.69
RTFDC1Q9BY42 ATF5-205ENST00000600336 682 ntTSL 2 BASIC19.34■□□□□ 0.69
RTFDC1Q9BY42 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RTFDC1Q9BY42 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
RTFDC1Q9BY42 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RTFDC1Q9BY42 REXO1L8P-201ENST00000604378 1897 ntBASIC19.34■□□□□ 0.69
RTFDC1Q9BY42 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RTFDC1Q9BY42 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RTFDC1Q9BY42 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RTFDC1Q9BY42 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
RTFDC1Q9BY42 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.34■□□□□ 0.69
RTFDC1Q9BY42 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
RTFDC1Q9BY42 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
RTFDC1Q9BY42 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC19.34■□□□□ 0.69
RTFDC1Q9BY42 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC19.34■□□□□ 0.69
RTFDC1Q9BY42 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC19.34■□□□□ 0.69
RTFDC1Q9BY42 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
RTFDC1Q9BY42 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
RTFDC1Q9BY42 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
RTFDC1Q9BY42 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
RTFDC1Q9BY42 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RTFDC1Q9BY42 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RTFDC1Q9BY42 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
RTFDC1Q9BY42 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
RTFDC1Q9BY42 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RTFDC1Q9BY42 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC19.33■□□□□ 0.69
RTFDC1Q9BY42 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
RTFDC1Q9BY42 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
RTFDC1Q9BY42 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RTFDC1Q9BY42 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC19.33■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms