Protein–RNA interactions for Protein: Q9BX63

BRIP1, Fanconi anemia group J protein, humanhuman

Predictions only

Length 1,249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1Q9BX63 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
BRIP1Q9BX63 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
BRIP1Q9BX63 TPO-206ENST00000382269 1155 ntTSL 5 BASIC19.75■□□□□ 0.75
BRIP1Q9BX63 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
BRIP1Q9BX63 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC19.75■□□□□ 0.75
BRIP1Q9BX63 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC19.75■□□□□ 0.75
BRIP1Q9BX63 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC19.75■□□□□ 0.75
BRIP1Q9BX63 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC19.75■□□□□ 0.75
BRIP1Q9BX63 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC19.75■□□□□ 0.75
BRIP1Q9BX63 SLED1-202ENST00000512051 380 ntBASIC19.75■□□□□ 0.75
BRIP1Q9BX63 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
BRIP1Q9BX63 RIT1-205ENST00000539040 919 ntTSL 2 BASIC19.75■□□□□ 0.75
BRIP1Q9BX63 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC19.75■□□□□ 0.75
BRIP1Q9BX63 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
BRIP1Q9BX63 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC19.75■□□□□ 0.75
BRIP1Q9BX63 AC091271.1-201ENST00000611877 1162 ntBASIC19.75■□□□□ 0.75
BRIP1Q9BX63 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
BRIP1Q9BX63 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
BRIP1Q9BX63 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
BRIP1Q9BX63 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC19.75■□□□□ 0.75
BRIP1Q9BX63 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC19.75■□□□□ 0.75
BRIP1Q9BX63 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
BRIP1Q9BX63 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
BRIP1Q9BX63 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC19.75■□□□□ 0.75
BRIP1Q9BX63 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC19.75■□□□□ 0.75
BRIP1Q9BX63 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
BRIP1Q9BX63 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
BRIP1Q9BX63 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
BRIP1Q9BX63 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
BRIP1Q9BX63 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
BRIP1Q9BX63 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
BRIP1Q9BX63 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC19.74■□□□□ 0.75
BRIP1Q9BX63 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
BRIP1Q9BX63 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
BRIP1Q9BX63 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
BRIP1Q9BX63 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
BRIP1Q9BX63 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
BRIP1Q9BX63 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
BRIP1Q9BX63 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
BRIP1Q9BX63 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC19.74■□□□□ 0.75
BRIP1Q9BX63 HLA-DPB2-205ENST00000435074 1188 ntBASIC19.74■□□□□ 0.75
BRIP1Q9BX63 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
BRIP1Q9BX63 AC006033.1-201ENST00000440505 426 ntBASIC19.74■□□□□ 0.75
BRIP1Q9BX63 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC19.74■□□□□ 0.75
BRIP1Q9BX63 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC19.74■□□□□ 0.75
BRIP1Q9BX63 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC19.74■□□□□ 0.75
BRIP1Q9BX63 ZBTB45P2-201ENST00000452245 1531 ntBASIC19.74■□□□□ 0.75
BRIP1Q9BX63 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
BRIP1Q9BX63 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
BRIP1Q9BX63 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC19.74■□□□□ 0.75
BRIP1Q9BX63 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
BRIP1Q9BX63 NF2-208ENST00000403435 2568 ntTSL 5 BASIC19.74■□□□□ 0.75
BRIP1Q9BX63 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
BRIP1Q9BX63 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
BRIP1Q9BX63 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
BRIP1Q9BX63 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
BRIP1Q9BX63 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
BRIP1Q9BX63 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC19.74■□□□□ 0.75
BRIP1Q9BX63 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC19.73■□□□□ 0.75
BRIP1Q9BX63 AC022211.2-201ENST00000585075 2527 ntBASIC19.73■□□□□ 0.75
BRIP1Q9BX63 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
BRIP1Q9BX63 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
BRIP1Q9BX63 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
BRIP1Q9BX63 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
BRIP1Q9BX63 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
BRIP1Q9BX63 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
BRIP1Q9BX63 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC19.73■□□□□ 0.75
BRIP1Q9BX63 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
BRIP1Q9BX63 ACKR1-201ENST00000368121 1240 ntBASIC19.73■□□□□ 0.75
BRIP1Q9BX63 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
BRIP1Q9BX63 AGER-203ENST00000375065 665 ntTSL 2 BASIC19.73■□□□□ 0.75
BRIP1Q9BX63 BRF1-202ENST00000379932 884 ntTSL 5 BASIC19.73■□□□□ 0.75
BRIP1Q9BX63 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC19.73■□□□□ 0.75
BRIP1Q9BX63 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC19.73■□□□□ 0.75
BRIP1Q9BX63 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC19.73■□□□□ 0.75
BRIP1Q9BX63 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
BRIP1Q9BX63 RPL8-205ENST00000527914 551 ntTSL 3 BASIC19.73■□□□□ 0.75
BRIP1Q9BX63 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
BRIP1Q9BX63 GNRHR2-203ENST00000581100 1187 ntBASIC19.73■□□□□ 0.75
BRIP1Q9BX63 ATF5-205ENST00000600336 682 ntTSL 2 BASIC19.73■□□□□ 0.75
BRIP1Q9BX63 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC19.73■□□□□ 0.75
BRIP1Q9BX63 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC19.73■□□□□ 0.75
BRIP1Q9BX63 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC19.73■□□□□ 0.75
BRIP1Q9BX63 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
BRIP1Q9BX63 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
BRIP1Q9BX63 AC009053.2-201ENST00000563701 2365 ntBASIC19.73■□□□□ 0.75
BRIP1Q9BX63 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
BRIP1Q9BX63 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC19.73■□□□□ 0.75
BRIP1Q9BX63 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
BRIP1Q9BX63 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
BRIP1Q9BX63 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
BRIP1Q9BX63 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC19.73■□□□□ 0.75
BRIP1Q9BX63 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
BRIP1Q9BX63 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
BRIP1Q9BX63 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
BRIP1Q9BX63 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
BRIP1Q9BX63 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC19.72■□□□□ 0.75
BRIP1Q9BX63 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
BRIP1Q9BX63 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
BRIP1Q9BX63 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms