Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
YIPF4Q9BSR8 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC15.25■□□□□ 0.03
YIPF4Q9BSR8 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC15.25■□□□□ 0.03
YIPF4Q9BSR8 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
YIPF4Q9BSR8 QPRT-203ENST00000562473 579 ntTSL 3 BASIC15.25■□□□□ 0.03
YIPF4Q9BSR8 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC15.25■□□□□ 0.03
YIPF4Q9BSR8 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC15.25■□□□□ 0.03
YIPF4Q9BSR8 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
YIPF4Q9BSR8 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
YIPF4Q9BSR8 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
YIPF4Q9BSR8 AL161645.1-201ENST00000622716 1255 ntBASIC15.25■□□□□ 0.03
YIPF4Q9BSR8 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC15.25■□□□□ 0.03
YIPF4Q9BSR8 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15.25■□□□□ 0.03
YIPF4Q9BSR8 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.25■□□□□ 0.03
YIPF4Q9BSR8 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
YIPF4Q9BSR8 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
YIPF4Q9BSR8 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
YIPF4Q9BSR8 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
YIPF4Q9BSR8 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
YIPF4Q9BSR8 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
YIPF4Q9BSR8 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
YIPF4Q9BSR8 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.25■□□□□ 0.03
YIPF4Q9BSR8 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
YIPF4Q9BSR8 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.24■□□□□ 0.03
YIPF4Q9BSR8 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
YIPF4Q9BSR8 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
YIPF4Q9BSR8 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
YIPF4Q9BSR8 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.24■□□□□ 0.03
YIPF4Q9BSR8 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
YIPF4Q9BSR8 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
YIPF4Q9BSR8 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
YIPF4Q9BSR8 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
YIPF4Q9BSR8 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.24■□□□□ 0.03
YIPF4Q9BSR8 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
YIPF4Q9BSR8 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
YIPF4Q9BSR8 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
YIPF4Q9BSR8 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
YIPF4Q9BSR8 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
YIPF4Q9BSR8 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
YIPF4Q9BSR8 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
YIPF4Q9BSR8 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
YIPF4Q9BSR8 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC15.24■□□□□ 0.03
YIPF4Q9BSR8 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC15.24■□□□□ 0.03
YIPF4Q9BSR8 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
YIPF4Q9BSR8 AC112191.1-201ENST00000523689 701 ntBASIC15.24■□□□□ 0.03
YIPF4Q9BSR8 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
YIPF4Q9BSR8 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.24■□□□□ 0.03
YIPF4Q9BSR8 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC15.24■□□□□ 0.03
YIPF4Q9BSR8 AC099522.2-201ENST00000607001 744 ntBASIC15.24■□□□□ 0.03
YIPF4Q9BSR8 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.24■□□□□ 0.03
YIPF4Q9BSR8 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
YIPF4Q9BSR8 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
YIPF4Q9BSR8 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC15.24■□□□□ 0.03
YIPF4Q9BSR8 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
YIPF4Q9BSR8 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
YIPF4Q9BSR8 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
YIPF4Q9BSR8 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
YIPF4Q9BSR8 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
YIPF4Q9BSR8 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
YIPF4Q9BSR8 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
YIPF4Q9BSR8 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
YIPF4Q9BSR8 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
YIPF4Q9BSR8 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.23■□□□□ 0.03
YIPF4Q9BSR8 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
YIPF4Q9BSR8 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
YIPF4Q9BSR8 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
YIPF4Q9BSR8 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
YIPF4Q9BSR8 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.23■□□□□ 0.03
YIPF4Q9BSR8 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.23■□□□□ 0.03
YIPF4Q9BSR8 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
YIPF4Q9BSR8 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
YIPF4Q9BSR8 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
YIPF4Q9BSR8 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
YIPF4Q9BSR8 PRYP6-201ENST00000514804 343 ntBASIC15.23■□□□□ 0.03
YIPF4Q9BSR8 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC15.23■□□□□ 0.03
YIPF4Q9BSR8 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
YIPF4Q9BSR8 AL138918.1-201ENST00000568306 659 ntBASIC15.23■□□□□ 0.03
YIPF4Q9BSR8 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
YIPF4Q9BSR8 AC091812.2-201ENST00000619081 385 ntBASIC15.23■□□□□ 0.03
YIPF4Q9BSR8 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.23■□□□□ 0.03
YIPF4Q9BSR8 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
YIPF4Q9BSR8 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.23■□□□□ 0.03
YIPF4Q9BSR8 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
YIPF4Q9BSR8 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC15.23■□□□□ 0.03
YIPF4Q9BSR8 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.23■□□□□ 0.03
YIPF4Q9BSR8 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.23■□□□□ 0.03
YIPF4Q9BSR8 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
YIPF4Q9BSR8 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
YIPF4Q9BSR8 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
YIPF4Q9BSR8 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.23■□□□□ 0.03
YIPF4Q9BSR8 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
YIPF4Q9BSR8 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
YIPF4Q9BSR8 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.23■□□□□ 0.03
YIPF4Q9BSR8 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
YIPF4Q9BSR8 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
YIPF4Q9BSR8 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
YIPF4Q9BSR8 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
YIPF4Q9BSR8 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
YIPF4Q9BSR8 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
YIPF4Q9BSR8 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms