Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC13.62□□□□□ -0.23
PCGF1Q9BSM1 BID-213ENST00000615414 2236 ntTSL 5 BASIC13.62□□□□□ -0.23
PCGF1Q9BSM1 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
PCGF1Q9BSM1 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
PCGF1Q9BSM1 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC13.61□□□□□ -0.23
PCGF1Q9BSM1 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC13.61□□□□□ -0.23
PCGF1Q9BSM1 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC13.61□□□□□ -0.23
PCGF1Q9BSM1 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
PCGF1Q9BSM1 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
PCGF1Q9BSM1 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
PCGF1Q9BSM1 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
PCGF1Q9BSM1 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
PCGF1Q9BSM1 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
PCGF1Q9BSM1 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC13.61□□□□□ -0.23
PCGF1Q9BSM1 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
PCGF1Q9BSM1 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
PCGF1Q9BSM1 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
PCGF1Q9BSM1 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
PCGF1Q9BSM1 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PCGF1Q9BSM1 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC13.61□□□□□ -0.23
PCGF1Q9BSM1 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC13.61□□□□□ -0.23
PCGF1Q9BSM1 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PCGF1Q9BSM1 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PCGF1Q9BSM1 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PCGF1Q9BSM1 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
PCGF1Q9BSM1 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PCGF1Q9BSM1 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
PCGF1Q9BSM1 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
PCGF1Q9BSM1 RBPMS2P1-201ENST00000437762 623 ntBASIC13.61□□□□□ -0.23
PCGF1Q9BSM1 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC13.61□□□□□ -0.23
PCGF1Q9BSM1 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC13.61□□□□□ -0.23
PCGF1Q9BSM1 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC13.61□□□□□ -0.23
PCGF1Q9BSM1 AC109322.1-201ENST00000524499 1264 ntBASIC13.61□□□□□ -0.23
PCGF1Q9BSM1 RFPL4AP1-201ENST00000530883 850 ntBASIC13.61□□□□□ -0.23
PCGF1Q9BSM1 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
PCGF1Q9BSM1 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC13.61□□□□□ -0.23
PCGF1Q9BSM1 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC13.61□□□□□ -0.23
PCGF1Q9BSM1 KRT8P23-201ENST00000560090 1207 ntBASIC13.61□□□□□ -0.23
PCGF1Q9BSM1 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC13.61□□□□□ -0.23
PCGF1Q9BSM1 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC13.61□□□□□ -0.23
PCGF1Q9BSM1 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
PCGF1Q9BSM1 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
PCGF1Q9BSM1 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
PCGF1Q9BSM1 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC13.61□□□□□ -0.23
PCGF1Q9BSM1 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
PCGF1Q9BSM1 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
PCGF1Q9BSM1 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PCGF1Q9BSM1 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
PCGF1Q9BSM1 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PCGF1Q9BSM1 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC13.61□□□□□ -0.23
PCGF1Q9BSM1 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
PCGF1Q9BSM1 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC13.61□□□□□ -0.23
PCGF1Q9BSM1 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
PCGF1Q9BSM1 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
PCGF1Q9BSM1 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
PCGF1Q9BSM1 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
PCGF1Q9BSM1 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PCGF1Q9BSM1 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
PCGF1Q9BSM1 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
PCGF1Q9BSM1 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC13.6□□□□□ -0.23
PCGF1Q9BSM1 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC13.6□□□□□ -0.23
PCGF1Q9BSM1 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
PCGF1Q9BSM1 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PCGF1Q9BSM1 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PCGF1Q9BSM1 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC13.6□□□□□ -0.23
PCGF1Q9BSM1 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
PCGF1Q9BSM1 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PCGF1Q9BSM1 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
PCGF1Q9BSM1 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
PCGF1Q9BSM1 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PCGF1Q9BSM1 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PCGF1Q9BSM1 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
PCGF1Q9BSM1 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
PCGF1Q9BSM1 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
PCGF1Q9BSM1 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PCGF1Q9BSM1 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
PCGF1Q9BSM1 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
PCGF1Q9BSM1 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
PCGF1Q9BSM1 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
PCGF1Q9BSM1 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
PCGF1Q9BSM1 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC13.6□□□□□ -0.23
PCGF1Q9BSM1 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
PCGF1Q9BSM1 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
PCGF1Q9BSM1 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC13.6□□□□□ -0.23
PCGF1Q9BSM1 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC13.6□□□□□ -0.23
PCGF1Q9BSM1 FAM86GP-201ENST00000448322 971 ntBASIC13.6□□□□□ -0.23
PCGF1Q9BSM1 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC13.6□□□□□ -0.23
PCGF1Q9BSM1 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC13.6□□□□□ -0.23
PCGF1Q9BSM1 HLA-J-203ENST00000494367 1087 ntBASIC13.6□□□□□ -0.23
PCGF1Q9BSM1 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC13.6□□□□□ -0.23
PCGF1Q9BSM1 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC13.6□□□□□ -0.23
PCGF1Q9BSM1 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC13.6□□□□□ -0.23
PCGF1Q9BSM1 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC13.6□□□□□ -0.23
PCGF1Q9BSM1 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC13.6□□□□□ -0.23
PCGF1Q9BSM1 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
PCGF1Q9BSM1 AC008267.7-201ENST00000624570 1194 ntBASIC13.6□□□□□ -0.23
PCGF1Q9BSM1 ORC5-208ENST00000626700 344 ntTSL 3 BASIC13.6□□□□□ -0.23
PCGF1Q9BSM1 AL662844.4-201ENST00000606367 2838 ntBASIC13.6□□□□□ -0.23
PCGF1Q9BSM1 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
PCGF1Q9BSM1 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms