Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
VGLL1Q99990 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
VGLL1Q99990 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC12.3□□□□□ -0.44
VGLL1Q99990 FAM45BP-202ENST00000592932 1624 ntBASIC12.3□□□□□ -0.44
VGLL1Q99990 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
VGLL1Q99990 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
VGLL1Q99990 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
VGLL1Q99990 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
VGLL1Q99990 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
VGLL1Q99990 AC016027.1-202ENST00000607927 1699 ntBASIC12.3□□□□□ -0.44
VGLL1Q99990 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
VGLL1Q99990 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
VGLL1Q99990 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
VGLL1Q99990 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
VGLL1Q99990 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC12.3□□□□□ -0.44
VGLL1Q99990 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC12.3□□□□□ -0.44
VGLL1Q99990 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC12.3□□□□□ -0.44
VGLL1Q99990 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
VGLL1Q99990 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
VGLL1Q99990 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
VGLL1Q99990 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
VGLL1Q99990 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
VGLL1Q99990 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC12.3□□□□□ -0.44
VGLL1Q99990 IGHV3-65-201ENST00000523210 341 ntBASIC12.3□□□□□ -0.44
VGLL1Q99990 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC12.3□□□□□ -0.44
VGLL1Q99990 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC12.3□□□□□ -0.44
VGLL1Q99990 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC12.3□□□□□ -0.44
VGLL1Q99990 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC12.3□□□□□ -0.44
VGLL1Q99990 AL160237.2-201ENST00000556165 472 ntBASIC12.3□□□□□ -0.44
VGLL1Q99990 RIN3-211ENST00000557762 517 ntTSL 3 BASIC12.3□□□□□ -0.44
VGLL1Q99990 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
VGLL1Q99990 PGM5P2-202ENST00000637225 1043 ntBASIC12.3□□□□□ -0.44
VGLL1Q99990 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC12.3□□□□□ -0.44
VGLL1Q99990 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
VGLL1Q99990 PPT1-215ENST00000641471 2368 ntBASIC12.3□□□□□ -0.44
VGLL1Q99990 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
VGLL1Q99990 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
VGLL1Q99990 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC12.3□□□□□ -0.44
VGLL1Q99990 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
VGLL1Q99990 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC12.3□□□□□ -0.44
VGLL1Q99990 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
VGLL1Q99990 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
VGLL1Q99990 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC12.3□□□□□ -0.44
VGLL1Q99990 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
VGLL1Q99990 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
VGLL1Q99990 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC12.3□□□□□ -0.44
VGLL1Q99990 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
VGLL1Q99990 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
VGLL1Q99990 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
VGLL1Q99990 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC12.3□□□□□ -0.44
VGLL1Q99990 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
VGLL1Q99990 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
VGLL1Q99990 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC12.29□□□□□ -0.44
VGLL1Q99990 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
VGLL1Q99990 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
VGLL1Q99990 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
VGLL1Q99990 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
VGLL1Q99990 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
VGLL1Q99990 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC12.29□□□□□ -0.44
VGLL1Q99990 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
VGLL1Q99990 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
VGLL1Q99990 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
VGLL1Q99990 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
VGLL1Q99990 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
VGLL1Q99990 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
VGLL1Q99990 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
VGLL1Q99990 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
VGLL1Q99990 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
VGLL1Q99990 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
VGLL1Q99990 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC12.29□□□□□ -0.44
VGLL1Q99990 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
VGLL1Q99990 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
VGLL1Q99990 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
VGLL1Q99990 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC12.29□□□□□ -0.44
VGLL1Q99990 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
VGLL1Q99990 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC12.29□□□□□ -0.44
VGLL1Q99990 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC12.29□□□□□ -0.44
VGLL1Q99990 MTRF1LP2-201ENST00000506027 1122 ntBASIC12.29□□□□□ -0.44
VGLL1Q99990 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC12.29□□□□□ -0.44
VGLL1Q99990 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC12.29□□□□□ -0.44
VGLL1Q99990 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
VGLL1Q99990 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC12.29□□□□□ -0.44
VGLL1Q99990 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
VGLL1Q99990 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC12.29□□□□□ -0.44
VGLL1Q99990 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
VGLL1Q99990 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC12.29□□□□□ -0.44
VGLL1Q99990 MIR1199-201ENST00000621445 119 ntBASIC12.29□□□□□ -0.44
VGLL1Q99990 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
VGLL1Q99990 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC12.29□□□□□ -0.44
VGLL1Q99990 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
VGLL1Q99990 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
VGLL1Q99990 LCK-206ENST00000373564 2137 ntTSL 5 BASIC12.29□□□□□ -0.44
VGLL1Q99990 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
VGLL1Q99990 U82695.1-201ENST00000635752 1889 ntBASIC12.29□□□□□ -0.44
VGLL1Q99990 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
VGLL1Q99990 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
VGLL1Q99990 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
VGLL1Q99990 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
VGLL1Q99990 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
VGLL1Q99990 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms