Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC18.21■□□□□ 0.51
PTPN18Q99952 UPF3AP2-201ENST00000457924 1132 ntBASIC18.21■□□□□ 0.51
PTPN18Q99952 AP001582.1-201ENST00000525856 295 ntBASIC18.21■□□□□ 0.51
PTPN18Q99952 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC18.21■□□□□ 0.51
PTPN18Q99952 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC18.21■□□□□ 0.51
PTPN18Q99952 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC18.21■□□□□ 0.51
PTPN18Q99952 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
PTPN18Q99952 AL096828.3-201ENST00000615354 462 ntBASIC18.21■□□□□ 0.51
PTPN18Q99952 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC18.21■□□□□ 0.51
PTPN18Q99952 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PTPN18Q99952 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PTPN18Q99952 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
PTPN18Q99952 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PTPN18Q99952 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC18.21■□□□□ 0.51
PTPN18Q99952 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PTPN18Q99952 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PTPN18Q99952 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
PTPN18Q99952 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.21■□□□□ 0.51
PTPN18Q99952 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PTPN18Q99952 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PTPN18Q99952 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC18.21■□□□□ 0.51
PTPN18Q99952 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC18.21■□□□□ 0.51
PTPN18Q99952 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
PTPN18Q99952 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
PTPN18Q99952 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
PTPN18Q99952 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTPN18Q99952 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.2■□□□□ 0.5
PTPN18Q99952 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
PTPN18Q99952 AC068880.1-201ENST00000507289 2297 ntBASIC18.2■□□□□ 0.5
PTPN18Q99952 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC18.2■□□□□ 0.5
PTPN18Q99952 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
PTPN18Q99952 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTPN18Q99952 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTPN18Q99952 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.2■□□□□ 0.5
PTPN18Q99952 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PTPN18Q99952 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC18.2■□□□□ 0.5
PTPN18Q99952 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTPN18Q99952 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PTPN18Q99952 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
PTPN18Q99952 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PTPN18Q99952 GUK1-206ENST00000366723 845 ntTSL 5 BASIC18.2■□□□□ 0.5
PTPN18Q99952 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTPN18Q99952 MIR1202-201ENST00000408529 83 ntBASIC18.2■□□□□ 0.5
PTPN18Q99952 POU5F1P6-201ENST00000466990 990 ntBASIC18.2■□□□□ 0.5
PTPN18Q99952 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC18.2■□□□□ 0.5
PTPN18Q99952 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC18.2■□□□□ 0.5
PTPN18Q99952 HCG18-245ENST00000602550 559 ntTSL 4 BASIC18.2■□□□□ 0.5
PTPN18Q99952 AC097359.3-201ENST00000603982 1210 ntBASIC18.2■□□□□ 0.5
PTPN18Q99952 AC107373.2-201ENST00000607735 490 ntBASIC18.2■□□□□ 0.5
PTPN18Q99952 AC132938.4-201ENST00000623835 848 ntBASIC18.2■□□□□ 0.5
PTPN18Q99952 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTPN18Q99952 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTPN18Q99952 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTPN18Q99952 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PTPN18Q99952 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTPN18Q99952 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTPN18Q99952 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTPN18Q99952 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTPN18Q99952 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC18.2■□□□□ 0.5
PTPN18Q99952 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTPN18Q99952 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.19■□□□□ 0.5
PTPN18Q99952 NOC2LP2-201ENST00000407594 1944 ntBASIC18.19■□□□□ 0.5
PTPN18Q99952 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PTPN18Q99952 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PTPN18Q99952 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC18.19■□□□□ 0.5
PTPN18Q99952 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.19■□□□□ 0.5
PTPN18Q99952 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTPN18Q99952 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTPN18Q99952 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
PTPN18Q99952 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTPN18Q99952 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTPN18Q99952 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PTPN18Q99952 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC18.19■□□□□ 0.5
PTPN18Q99952 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTPN18Q99952 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PTPN18Q99952 MTX1P1-201ENST00000440904 838 ntBASIC18.19■□□□□ 0.5
PTPN18Q99952 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC18.19■□□□□ 0.5
PTPN18Q99952 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTPN18Q99952 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PTPN18Q99952 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTPN18Q99952 RERG-205ENST00000537647 935 ntTSL 2 BASIC18.19■□□□□ 0.5
PTPN18Q99952 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC18.19■□□□□ 0.5
PTPN18Q99952 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC18.19■□□□□ 0.5
PTPN18Q99952 MIR4706-201ENST00000582134 82 ntBASIC18.19■□□□□ 0.5
PTPN18Q99952 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC18.19■□□□□ 0.5
PTPN18Q99952 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
PTPN18Q99952 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTPN18Q99952 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC18.19■□□□□ 0.5
PTPN18Q99952 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC18.19■□□□□ 0.5
PTPN18Q99952 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
PTPN18Q99952 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTPN18Q99952 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PTPN18Q99952 TP73-209ENST00000603362 1668 ntTSL 5 BASIC18.18■□□□□ 0.5
PTPN18Q99952 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC18.18■□□□□ 0.5
PTPN18Q99952 AC015818.8-201ENST00000587907 1519 ntBASIC18.18■□□□□ 0.5
PTPN18Q99952 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
PTPN18Q99952 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
PTPN18Q99952 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PTPN18Q99952 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PTPN18Q99952 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms