Protein–RNA interactions for Protein: Q96S86

HAPLN3, Hyaluronan and proteoglycan link protein 3, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HAPLN3Q96S86 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.69■□□□□ 0.26
HAPLN3Q96S86 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
HAPLN3Q96S86 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.69■□□□□ 0.26
HAPLN3Q96S86 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HAPLN3Q96S86 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
HAPLN3Q96S86 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HAPLN3Q96S86 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HAPLN3Q96S86 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HAPLN3Q96S86 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.69■□□□□ 0.26
HAPLN3Q96S86 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.69■□□□□ 0.26
HAPLN3Q96S86 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.69■□□□□ 0.26
HAPLN3Q96S86 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
HAPLN3Q96S86 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HAPLN3Q96S86 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.69■□□□□ 0.26
HAPLN3Q96S86 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC16.69■□□□□ 0.26
HAPLN3Q96S86 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC16.69■□□□□ 0.26
HAPLN3Q96S86 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.69■□□□□ 0.26
HAPLN3Q96S86 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.69■□□□□ 0.26
HAPLN3Q96S86 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC16.69■□□□□ 0.26
HAPLN3Q96S86 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
HAPLN3Q96S86 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.69■□□□□ 0.26
HAPLN3Q96S86 AL133215.2-201ENST00000609242 977 ntBASIC16.69■□□□□ 0.26
HAPLN3Q96S86 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
HAPLN3Q96S86 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HAPLN3Q96S86 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HAPLN3Q96S86 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HAPLN3Q96S86 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HAPLN3Q96S86 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HAPLN3Q96S86 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HAPLN3Q96S86 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HAPLN3Q96S86 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC16.69■□□□□ 0.26
HAPLN3Q96S86 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.69■□□□□ 0.26
HAPLN3Q96S86 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.69■□□□□ 0.26
HAPLN3Q96S86 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HAPLN3Q96S86 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.69■□□□□ 0.26
HAPLN3Q96S86 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.69■□□□□ 0.26
HAPLN3Q96S86 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HAPLN3Q96S86 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HAPLN3Q96S86 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HAPLN3Q96S86 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.69■□□□□ 0.26
HAPLN3Q96S86 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
HAPLN3Q96S86 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
HAPLN3Q96S86 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HAPLN3Q96S86 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HAPLN3Q96S86 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.68■□□□□ 0.26
HAPLN3Q96S86 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
HAPLN3Q96S86 AL136982.4-201ENST00000437689 1740 ntBASIC16.68■□□□□ 0.26
HAPLN3Q96S86 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
HAPLN3Q96S86 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.68■□□□□ 0.26
HAPLN3Q96S86 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
HAPLN3Q96S86 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HAPLN3Q96S86 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HAPLN3Q96S86 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HAPLN3Q96S86 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HAPLN3Q96S86 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HAPLN3Q96S86 PMS2P2-201ENST00000425039 1128 ntBASIC16.68■□□□□ 0.26
HAPLN3Q96S86 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC16.68■□□□□ 0.26
HAPLN3Q96S86 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.68■□□□□ 0.26
HAPLN3Q96S86 FAM86GP-201ENST00000448322 971 ntBASIC16.68■□□□□ 0.26
HAPLN3Q96S86 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.68■□□□□ 0.26
HAPLN3Q96S86 KLF2P3-201ENST00000451977 1087 ntBASIC16.68■□□□□ 0.26
HAPLN3Q96S86 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HAPLN3Q96S86 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.68■□□□□ 0.26
HAPLN3Q96S86 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.68■□□□□ 0.26
HAPLN3Q96S86 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC16.68■□□□□ 0.26
HAPLN3Q96S86 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.68■□□□□ 0.26
HAPLN3Q96S86 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.68■□□□□ 0.26
HAPLN3Q96S86 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HAPLN3Q96S86 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HAPLN3Q96S86 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HAPLN3Q96S86 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.68■□□□□ 0.26
HAPLN3Q96S86 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HAPLN3Q96S86 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HAPLN3Q96S86 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.68■□□□□ 0.26
HAPLN3Q96S86 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HAPLN3Q96S86 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.68■□□□□ 0.26
HAPLN3Q96S86 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
HAPLN3Q96S86 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HAPLN3Q96S86 AC069224.1-201ENST00000566372 1715 ntBASIC16.67■□□□□ 0.26
HAPLN3Q96S86 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HAPLN3Q96S86 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HAPLN3Q96S86 AL603832.2-201ENST00000566195 2125 ntBASIC16.67■□□□□ 0.26
HAPLN3Q96S86 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HAPLN3Q96S86 AC099063.4-201ENST00000641099 1602 ntBASIC16.67■□□□□ 0.26
HAPLN3Q96S86 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HAPLN3Q96S86 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
HAPLN3Q96S86 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HAPLN3Q96S86 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
HAPLN3Q96S86 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HAPLN3Q96S86 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
HAPLN3Q96S86 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HAPLN3Q96S86 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HAPLN3Q96S86 RPS19-201ENST00000221975 500 ntTSL 3 BASIC16.67■□□□□ 0.26
HAPLN3Q96S86 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HAPLN3Q96S86 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
HAPLN3Q96S86 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HAPLN3Q96S86 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
HAPLN3Q96S86 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
HAPLN3Q96S86 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HAPLN3Q96S86 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms