Protein–RNA interactions for Protein: Q96RY5

CRAMP1, Protein cramped-like, humanhuman

Predictions only

Length 1,269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1Q96RY5 IFT20-208ENST00000578985 831 ntTSL 3 BASIC19.47■□□□□ 0.71
CRAMP1Q96RY5 AC009542.2-202ENST00000619004 1067 ntBASIC19.47■□□□□ 0.71
CRAMP1Q96RY5 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CRAMP1Q96RY5 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CRAMP1Q96RY5 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
CRAMP1Q96RY5 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CRAMP1Q96RY5 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CRAMP1Q96RY5 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CRAMP1Q96RY5 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CRAMP1Q96RY5 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CRAMP1Q96RY5 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC19.47■□□□□ 0.71
CRAMP1Q96RY5 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CRAMP1Q96RY5 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CRAMP1Q96RY5 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CRAMP1Q96RY5 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CRAMP1Q96RY5 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CRAMP1Q96RY5 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC19.46■□□□□ 0.71
CRAMP1Q96RY5 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CRAMP1Q96RY5 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CRAMP1Q96RY5 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
CRAMP1Q96RY5 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC19.46■□□□□ 0.71
CRAMP1Q96RY5 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CRAMP1Q96RY5 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CRAMP1Q96RY5 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CRAMP1Q96RY5 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CRAMP1Q96RY5 MIR1247-201ENST00000408206 136 ntBASIC19.46■□□□□ 0.71
CRAMP1Q96RY5 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC19.46■□□□□ 0.71
CRAMP1Q96RY5 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC19.46■□□□□ 0.71
CRAMP1Q96RY5 GPAA1P2-201ENST00000417923 928 ntBASIC19.46■□□□□ 0.71
CRAMP1Q96RY5 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CRAMP1Q96RY5 ZNF767P-206ENST00000513792 565 ntBASIC19.46■□□□□ 0.71
CRAMP1Q96RY5 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
CRAMP1Q96RY5 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
CRAMP1Q96RY5 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC19.46■□□□□ 0.71
CRAMP1Q96RY5 CMC2-214ENST00000565925 640 ntTSL 5 BASIC19.46■□□□□ 0.71
CRAMP1Q96RY5 RN7SL560P-201ENST00000577943 264 ntBASIC19.46■□□□□ 0.71
CRAMP1Q96RY5 MIR3615-201ENST00000581999 87 ntBASIC19.46■□□□□ 0.71
CRAMP1Q96RY5 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CRAMP1Q96RY5 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC19.46■□□□□ 0.71
CRAMP1Q96RY5 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC19.46■□□□□ 0.71
CRAMP1Q96RY5 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CRAMP1Q96RY5 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CRAMP1Q96RY5 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CRAMP1Q96RY5 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CRAMP1Q96RY5 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CRAMP1Q96RY5 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC19.46■□□□□ 0.71
CRAMP1Q96RY5 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CRAMP1Q96RY5 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CRAMP1Q96RY5 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CRAMP1Q96RY5 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CRAMP1Q96RY5 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CRAMP1Q96RY5 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
CRAMP1Q96RY5 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
CRAMP1Q96RY5 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CRAMP1Q96RY5 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CRAMP1Q96RY5 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CRAMP1Q96RY5 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC19.45■□□□□ 0.7
CRAMP1Q96RY5 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC19.45■□□□□ 0.7
CRAMP1Q96RY5 LARP4-220ENST00000615080 856 ntTSL 5 BASIC19.45■□□□□ 0.7
CRAMP1Q96RY5 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC19.45■□□□□ 0.7
CRAMP1Q96RY5 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CRAMP1Q96RY5 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
CRAMP1Q96RY5 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
CRAMP1Q96RY5 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC19.45■□□□□ 0.7
CRAMP1Q96RY5 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CRAMP1Q96RY5 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CRAMP1Q96RY5 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CRAMP1Q96RY5 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC19.44■□□□□ 0.7
CRAMP1Q96RY5 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC19.44■□□□□ 0.7
CRAMP1Q96RY5 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CRAMP1Q96RY5 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CRAMP1Q96RY5 CEP83-AS1-201ENST00000623122 2482 ntBASIC19.44■□□□□ 0.7
CRAMP1Q96RY5 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CRAMP1Q96RY5 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CRAMP1Q96RY5 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CRAMP1Q96RY5 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CRAMP1Q96RY5 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CRAMP1Q96RY5 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC19.44■□□□□ 0.7
CRAMP1Q96RY5 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC19.44■□□□□ 0.7
CRAMP1Q96RY5 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC19.44■□□□□ 0.7
CRAMP1Q96RY5 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC19.44■□□□□ 0.7
CRAMP1Q96RY5 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CRAMP1Q96RY5 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CRAMP1Q96RY5 C2orf27AP3-201ENST00000434123 579 ntBASIC19.44■□□□□ 0.7
CRAMP1Q96RY5 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC19.44■□□□□ 0.7
CRAMP1Q96RY5 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC19.44■□□□□ 0.7
CRAMP1Q96RY5 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC19.44■□□□□ 0.7
CRAMP1Q96RY5 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC19.44■□□□□ 0.7
CRAMP1Q96RY5 KSR1-207ENST00000578981 748 ntTSL 4 BASIC19.44■□□□□ 0.7
CRAMP1Q96RY5 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC19.44■□□□□ 0.7
CRAMP1Q96RY5 AL354718.3-201ENST00000616414 581 ntBASIC19.44■□□□□ 0.7
CRAMP1Q96RY5 CR382287.1-201ENST00000623954 586 ntBASIC19.44■□□□□ 0.7
CRAMP1Q96RY5 AL139099.5-201ENST00000635274 300 ntBASIC19.44■□□□□ 0.7
CRAMP1Q96RY5 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CRAMP1Q96RY5 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CRAMP1Q96RY5 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC19.44■□□□□ 0.7
CRAMP1Q96RY5 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC19.44■□□□□ 0.7
CRAMP1Q96RY5 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CRAMP1Q96RY5 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CRAMP1Q96RY5 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms