Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
SLC46A1Q96NT5 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
SLC46A1Q96NT5 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
SLC46A1Q96NT5 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
SLC46A1Q96NT5 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC15.37■□□□□ 0.05
SLC46A1Q96NT5 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC15.37■□□□□ 0.05
SLC46A1Q96NT5 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC15.37■□□□□ 0.05
SLC46A1Q96NT5 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC15.37■□□□□ 0.05
SLC46A1Q96NT5 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC15.37■□□□□ 0.05
SLC46A1Q96NT5 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC15.37■□□□□ 0.05
SLC46A1Q96NT5 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
SLC46A1Q96NT5 AL033527.5-201ENST00000641382 801 ntBASIC15.37■□□□□ 0.05
SLC46A1Q96NT5 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
SLC46A1Q96NT5 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC15.37■□□□□ 0.05
SLC46A1Q96NT5 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
SLC46A1Q96NT5 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.37■□□□□ 0.05
SLC46A1Q96NT5 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
SLC46A1Q96NT5 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
SLC46A1Q96NT5 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
SLC46A1Q96NT5 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SLC46A1Q96NT5 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
SLC46A1Q96NT5 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SLC46A1Q96NT5 AC092171.3-201ENST00000610122 2651 ntBASIC15.37■□□□□ 0.05
SLC46A1Q96NT5 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
SLC46A1Q96NT5 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
SLC46A1Q96NT5 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC15.37■□□□□ 0.05
SLC46A1Q96NT5 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SLC46A1Q96NT5 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.37■□□□□ 0.05
SLC46A1Q96NT5 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC15.37■□□□□ 0.05
SLC46A1Q96NT5 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
SLC46A1Q96NT5 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
SLC46A1Q96NT5 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
SLC46A1Q96NT5 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
SLC46A1Q96NT5 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC15.36■□□□□ 0.05
SLC46A1Q96NT5 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
SLC46A1Q96NT5 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SLC46A1Q96NT5 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
SLC46A1Q96NT5 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
SLC46A1Q96NT5 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
SLC46A1Q96NT5 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
SLC46A1Q96NT5 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
SLC46A1Q96NT5 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SLC46A1Q96NT5 RPF1-202ENST00000370656 724 ntTSL 2 BASIC15.36■□□□□ 0.05
SLC46A1Q96NT5 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
SLC46A1Q96NT5 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
SLC46A1Q96NT5 BOLA2P3-201ENST00000404566 256 ntBASIC15.36■□□□□ 0.05
SLC46A1Q96NT5 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
SLC46A1Q96NT5 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
SLC46A1Q96NT5 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC15.36■□□□□ 0.05
SLC46A1Q96NT5 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC15.36■□□□□ 0.05
SLC46A1Q96NT5 RHOA-206ENST00000454011 889 ntTSL 2 BASIC15.36■□□□□ 0.05
SLC46A1Q96NT5 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC15.36■□□□□ 0.05
SLC46A1Q96NT5 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC15.36■□□□□ 0.05
SLC46A1Q96NT5 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SLC46A1Q96NT5 TIMM17BP1-201ENST00000545713 516 ntBASIC15.36■□□□□ 0.05
SLC46A1Q96NT5 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC15.36■□□□□ 0.05
SLC46A1Q96NT5 AC015936.2-201ENST00000593177 259 ntBASIC15.36■□□□□ 0.05
SLC46A1Q96NT5 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SLC46A1Q96NT5 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
SLC46A1Q96NT5 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
SLC46A1Q96NT5 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
SLC46A1Q96NT5 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SLC46A1Q96NT5 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
SLC46A1Q96NT5 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
SLC46A1Q96NT5 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
SLC46A1Q96NT5 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC15.36■□□□□ 0.05
SLC46A1Q96NT5 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC15.36■□□□□ 0.05
SLC46A1Q96NT5 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC15.36■□□□□ 0.05
SLC46A1Q96NT5 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.36■□□□□ 0.05
SLC46A1Q96NT5 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SLC46A1Q96NT5 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
SLC46A1Q96NT5 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
SLC46A1Q96NT5 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC15.36■□□□□ 0.05
SLC46A1Q96NT5 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
SLC46A1Q96NT5 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SLC46A1Q96NT5 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.35■□□□□ 0.05
SLC46A1Q96NT5 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
SLC46A1Q96NT5 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SLC46A1Q96NT5 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC15.35■□□□□ 0.05
SLC46A1Q96NT5 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.35■□□□□ 0.05
SLC46A1Q96NT5 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SLC46A1Q96NT5 PCDHA14-201ENST00000506751 2298 ntBASIC15.35■□□□□ 0.05
SLC46A1Q96NT5 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC15.35■□□□□ 0.05
SLC46A1Q96NT5 REXO1L6P-201ENST00000603433 1515 ntBASIC15.35■□□□□ 0.05
SLC46A1Q96NT5 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SLC46A1Q96NT5 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC15.35■□□□□ 0.05
SLC46A1Q96NT5 RAD18-204ENST00000418463 563 ntTSL 4 BASIC15.35■□□□□ 0.05
SLC46A1Q96NT5 RAD18-205ENST00000421052 582 ntTSL 3 BASIC15.35■□□□□ 0.05
SLC46A1Q96NT5 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
SLC46A1Q96NT5 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC15.35■□□□□ 0.05
SLC46A1Q96NT5 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SLC46A1Q96NT5 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
SLC46A1Q96NT5 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC15.35■□□□□ 0.05
SLC46A1Q96NT5 AC092552.1-201ENST00000547243 906 ntBASIC15.35■□□□□ 0.05
SLC46A1Q96NT5 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC15.35■□□□□ 0.05
SLC46A1Q96NT5 AC008735.3-201ENST00000596646 500 ntBASIC15.35■□□□□ 0.05
SLC46A1Q96NT5 AL606495.2-201ENST00000605867 535 ntBASIC15.35■□□□□ 0.05
SLC46A1Q96NT5 MIR8072-201ENST00000614241 80 ntBASIC15.35■□□□□ 0.05
SLC46A1Q96NT5 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
SLC46A1Q96NT5 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms