Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC15.42■□□□□ 0.06
ITCHQ96J02 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.42■□□□□ 0.06
ITCHQ96J02 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
ITCHQ96J02 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC15.42■□□□□ 0.06
ITCHQ96J02 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ITCHQ96J02 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ITCHQ96J02 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
ITCHQ96J02 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.41■□□□□ 0.06
ITCHQ96J02 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
ITCHQ96J02 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ITCHQ96J02 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
ITCHQ96J02 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
ITCHQ96J02 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15.41■□□□□ 0.06
ITCHQ96J02 PPT1-215ENST00000641471 2368 ntBASIC15.41■□□□□ 0.06
ITCHQ96J02 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.41■□□□□ 0.06
ITCHQ96J02 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ITCHQ96J02 TNRC18P2-201ENST00000417666 2714 ntBASIC15.41■□□□□ 0.06
ITCHQ96J02 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
ITCHQ96J02 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
ITCHQ96J02 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
ITCHQ96J02 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
ITCHQ96J02 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
ITCHQ96J02 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ITCHQ96J02 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC15.41■□□□□ 0.06
ITCHQ96J02 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.41■□□□□ 0.06
ITCHQ96J02 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
ITCHQ96J02 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
ITCHQ96J02 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ITCHQ96J02 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC15.41■□□□□ 0.06
ITCHQ96J02 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC15.41■□□□□ 0.06
ITCHQ96J02 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
ITCHQ96J02 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC15.41■□□□□ 0.06
ITCHQ96J02 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC15.41■□□□□ 0.06
ITCHQ96J02 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC15.41■□□□□ 0.06
ITCHQ96J02 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC15.41■□□□□ 0.06
ITCHQ96J02 POLD4-207ENST00000531239 584 ntTSL 2 BASIC15.41■□□□□ 0.06
ITCHQ96J02 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC15.41■□□□□ 0.06
ITCHQ96J02 FAM215A-202ENST00000632077 792 ntBASIC15.41■□□□□ 0.06
ITCHQ96J02 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.41■□□□□ 0.06
ITCHQ96J02 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.41■□□□□ 0.06
ITCHQ96J02 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
ITCHQ96J02 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC15.41■□□□□ 0.06
ITCHQ96J02 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.41■□□□□ 0.06
ITCHQ96J02 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.41■□□□□ 0.06
ITCHQ96J02 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.41■□□□□ 0.06
ITCHQ96J02 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.41■□□□□ 0.06
ITCHQ96J02 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
ITCHQ96J02 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ITCHQ96J02 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.41■□□□□ 0.06
ITCHQ96J02 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
ITCHQ96J02 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
ITCHQ96J02 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.41■□□□□ 0.06
ITCHQ96J02 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.41■□□□□ 0.06
ITCHQ96J02 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ITCHQ96J02 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
ITCHQ96J02 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC15.41■□□□□ 0.06
ITCHQ96J02 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ITCHQ96J02 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
ITCHQ96J02 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ITCHQ96J02 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
ITCHQ96J02 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
ITCHQ96J02 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ITCHQ96J02 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
ITCHQ96J02 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ITCHQ96J02 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.4■□□□□ 0.06
ITCHQ96J02 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ITCHQ96J02 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
ITCHQ96J02 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
ITCHQ96J02 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
ITCHQ96J02 AC020658.6-201ENST00000623564 1870 ntBASIC15.4■□□□□ 0.06
ITCHQ96J02 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.4■□□□□ 0.06
ITCHQ96J02 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ITCHQ96J02 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ITCHQ96J02 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
ITCHQ96J02 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC15.4■□□□□ 0.06
ITCHQ96J02 VN2R19P-201ENST00000442399 1052 ntBASIC15.4■□□□□ 0.06
ITCHQ96J02 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ITCHQ96J02 EMBP1-201ENST00000458200 901 ntBASIC15.4■□□□□ 0.06
ITCHQ96J02 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
ITCHQ96J02 HS6ST1P1-201ENST00000481504 1234 ntBASIC15.4■□□□□ 0.06
ITCHQ96J02 AC092910.1-201ENST00000482027 1129 ntBASIC15.4■□□□□ 0.06
ITCHQ96J02 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
ITCHQ96J02 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.4■□□□□ 0.06
ITCHQ96J02 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.4■□□□□ 0.06
ITCHQ96J02 AC109635.5-201ENST00000533593 962 ntBASIC15.4■□□□□ 0.06
ITCHQ96J02 TCAP-202ENST00000578283 583 ntTSL 5 BASIC15.4■□□□□ 0.06
ITCHQ96J02 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ITCHQ96J02 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ITCHQ96J02 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC15.4■□□□□ 0.06
ITCHQ96J02 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
ITCHQ96J02 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ITCHQ96J02 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ITCHQ96J02 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
ITCHQ96J02 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.4■□□□□ 0.06
ITCHQ96J02 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ITCHQ96J02 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC15.4■□□□□ 0.06
ITCHQ96J02 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.39■□□□□ 0.05
ITCHQ96J02 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
ITCHQ96J02 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
ITCHQ96J02 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms