Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM11Q96F44 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM11Q96F44 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.07■□□□□ 0.32
TRIM11Q96F44 MDH2-205ENST00000461263 648 ntTSL 2 BASIC17.07■□□□□ 0.32
TRIM11Q96F44 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM11Q96F44 EHF-205ENST00000527935 557 ntTSL 2 BASIC17.07■□□□□ 0.32
TRIM11Q96F44 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM11Q96F44 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM11Q96F44 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM11Q96F44 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
TRIM11Q96F44 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM11Q96F44 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM11Q96F44 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM11Q96F44 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM11Q96F44 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM11Q96F44 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM11Q96F44 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM11Q96F44 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM11Q96F44 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC17.07■□□□□ 0.32
TRIM11Q96F44 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM11Q96F44 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
TRIM11Q96F44 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM11Q96F44 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM11Q96F44 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM11Q96F44 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC17.06■□□□□ 0.32
TRIM11Q96F44 AC063926.3-201ENST00000624734 5658 ntBASIC17.06■□□□□ 0.32
TRIM11Q96F44 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC17.06■□□□□ 0.32
TRIM11Q96F44 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
TRIM11Q96F44 MCCD1P2-201ENST00000423228 335 ntBASIC17.06■□□□□ 0.32
TRIM11Q96F44 ACTG1P14-201ENST00000446382 1122 ntBASIC17.06■□□□□ 0.32
TRIM11Q96F44 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM11Q96F44 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM11Q96F44 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC17.06■□□□□ 0.32
TRIM11Q96F44 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17.06■□□□□ 0.32
TRIM11Q96F44 AC092902.6-201ENST00000641783 218 ntBASIC17.06■□□□□ 0.32
TRIM11Q96F44 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM11Q96F44 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM11Q96F44 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM11Q96F44 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM11Q96F44 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM11Q96F44 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM11Q96F44 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC17.06■□□□□ 0.32
TRIM11Q96F44 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM11Q96F44 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC17.06■□□□□ 0.32
TRIM11Q96F44 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
TRIM11Q96F44 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM11Q96F44 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC17.06■□□□□ 0.32
TRIM11Q96F44 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM11Q96F44 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM11Q96F44 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM11Q96F44 PRAL-201ENST00000624952 3286 ntBASIC17.06■□□□□ 0.32
TRIM11Q96F44 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM11Q96F44 FOXO1B-201ENST00000504678 1527 ntBASIC17.06■□□□□ 0.32
TRIM11Q96F44 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM11Q96F44 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.05■□□□□ 0.32
TRIM11Q96F44 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC17.05■□□□□ 0.32
TRIM11Q96F44 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM11Q96F44 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM11Q96F44 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
TRIM11Q96F44 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM11Q96F44 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM11Q96F44 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC17.05■□□□□ 0.32
TRIM11Q96F44 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM11Q96F44 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC17.05■□□□□ 0.32
TRIM11Q96F44 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM11Q96F44 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC17.05■□□□□ 0.32
TRIM11Q96F44 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM11Q96F44 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
TRIM11Q96F44 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
TRIM11Q96F44 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.05■□□□□ 0.32
TRIM11Q96F44 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
TRIM11Q96F44 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM11Q96F44 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.05■□□□□ 0.32
TRIM11Q96F44 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM11Q96F44 FAM220BP-201ENST00000377689 816 ntBASIC17.05■□□□□ 0.32
TRIM11Q96F44 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM11Q96F44 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.05■□□□□ 0.32
TRIM11Q96F44 AC023274.1-201ENST00000418278 595 ntBASIC17.05■□□□□ 0.32
TRIM11Q96F44 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC17.05■□□□□ 0.32
TRIM11Q96F44 AC142381.1-201ENST00000426099 345 ntBASIC17.05■□□□□ 0.32
TRIM11Q96F44 ADH5P3-201ENST00000433842 1137 ntBASIC17.05■□□□□ 0.32
TRIM11Q96F44 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
TRIM11Q96F44 SPDYE11-202ENST00000450699 704 ntBASIC17.05■□□□□ 0.32
TRIM11Q96F44 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
TRIM11Q96F44 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.05■□□□□ 0.32
TRIM11Q96F44 KRT18P58-201ENST00000527480 1120 ntBASIC17.05■□□□□ 0.32
TRIM11Q96F44 SPDYE9P-201ENST00000570642 692 ntBASIC17.05■□□□□ 0.32
TRIM11Q96F44 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC17.05■□□□□ 0.32
TRIM11Q96F44 SPDYE10P-202ENST00000612005 668 ntBASIC17.05■□□□□ 0.32
TRIM11Q96F44 SPDYE8P-202ENST00000612377 668 ntBASIC17.05■□□□□ 0.32
TRIM11Q96F44 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC17.05■□□□□ 0.32
TRIM11Q96F44 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM11Q96F44 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM11Q96F44 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM11Q96F44 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC17.05■□□□□ 0.32
TRIM11Q96F44 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM11Q96F44 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC17.05■□□□□ 0.32
TRIM11Q96F44 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM11Q96F44 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM11Q96F44 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms