Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC15.57■□□□□ 0.08
VPS33AQ96AX1 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
VPS33AQ96AX1 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
VPS33AQ96AX1 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC15.57■□□□□ 0.08
VPS33AQ96AX1 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
VPS33AQ96AX1 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
VPS33AQ96AX1 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.56■□□□□ 0.08
VPS33AQ96AX1 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
VPS33AQ96AX1 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VPS33AQ96AX1 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.56■□□□□ 0.08
VPS33AQ96AX1 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
VPS33AQ96AX1 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
VPS33AQ96AX1 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VPS33AQ96AX1 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VPS33AQ96AX1 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
VPS33AQ96AX1 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VPS33AQ96AX1 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.56■□□□□ 0.08
VPS33AQ96AX1 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VPS33AQ96AX1 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VPS33AQ96AX1 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VPS33AQ96AX1 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VPS33AQ96AX1 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
VPS33AQ96AX1 HMGA1P7-201ENST00000406908 502 ntBASIC15.56■□□□□ 0.08
VPS33AQ96AX1 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
VPS33AQ96AX1 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC15.56■□□□□ 0.08
VPS33AQ96AX1 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
VPS33AQ96AX1 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC15.56■□□□□ 0.08
VPS33AQ96AX1 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
VPS33AQ96AX1 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC15.56■□□□□ 0.08
VPS33AQ96AX1 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC15.56■□□□□ 0.08
VPS33AQ96AX1 MIR4515-201ENST00000584082 81 ntBASIC15.56■□□□□ 0.08
VPS33AQ96AX1 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
VPS33AQ96AX1 LINC01711-201ENST00000598340 967 ntBASIC15.56■□□□□ 0.08
VPS33AQ96AX1 AC008735.5-201ENST00000623544 497 ntBASIC15.56■□□□□ 0.08
VPS33AQ96AX1 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
VPS33AQ96AX1 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.56■□□□□ 0.08
VPS33AQ96AX1 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VPS33AQ96AX1 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC15.56■□□□□ 0.08
VPS33AQ96AX1 AP002414.3-201ENST00000589352 1468 ntBASIC15.56■□□□□ 0.08
VPS33AQ96AX1 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
VPS33AQ96AX1 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
VPS33AQ96AX1 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
VPS33AQ96AX1 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
VPS33AQ96AX1 TCAF2P1-201ENST00000291129 2421 ntBASIC15.56■□□□□ 0.08
VPS33AQ96AX1 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC15.56■□□□□ 0.08
VPS33AQ96AX1 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
VPS33AQ96AX1 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC15.56■□□□□ 0.08
VPS33AQ96AX1 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.56■□□□□ 0.08
VPS33AQ96AX1 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.56■□□□□ 0.08
VPS33AQ96AX1 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
VPS33AQ96AX1 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
VPS33AQ96AX1 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.56■□□□□ 0.08
VPS33AQ96AX1 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VPS33AQ96AX1 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC15.56■□□□□ 0.08
VPS33AQ96AX1 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VPS33AQ96AX1 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
VPS33AQ96AX1 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.55■□□□□ 0.08
VPS33AQ96AX1 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VPS33AQ96AX1 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
VPS33AQ96AX1 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.55■□□□□ 0.08
VPS33AQ96AX1 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.55■□□□□ 0.08
VPS33AQ96AX1 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.55■□□□□ 0.08
VPS33AQ96AX1 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
VPS33AQ96AX1 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
VPS33AQ96AX1 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VPS33AQ96AX1 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
VPS33AQ96AX1 AC023157.3-201ENST00000619086 2088 ntBASIC15.55■□□□□ 0.08
VPS33AQ96AX1 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
VPS33AQ96AX1 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC15.55■□□□□ 0.08
VPS33AQ96AX1 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
VPS33AQ96AX1 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.55■□□□□ 0.08
VPS33AQ96AX1 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.55■□□□□ 0.08
VPS33AQ96AX1 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC15.55■□□□□ 0.08
VPS33AQ96AX1 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
VPS33AQ96AX1 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VPS33AQ96AX1 MRPL20P1-201ENST00000400819 433 ntBASIC15.55■□□□□ 0.08
VPS33AQ96AX1 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.55■□□□□ 0.08
VPS33AQ96AX1 FAM185BP-201ENST00000443595 716 ntBASIC15.55■□□□□ 0.08
VPS33AQ96AX1 AC108073.2-201ENST00000464002 357 ntBASIC15.55■□□□□ 0.08
VPS33AQ96AX1 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC15.55■□□□□ 0.08
VPS33AQ96AX1 RNPS1P1-201ENST00000507437 918 ntBASIC15.55■□□□□ 0.08
VPS33AQ96AX1 AC073648.2-201ENST00000510116 352 ntBASIC15.55■□□□□ 0.08
VPS33AQ96AX1 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC15.55■□□□□ 0.08
VPS33AQ96AX1 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VPS33AQ96AX1 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
VPS33AQ96AX1 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC15.55■□□□□ 0.08
VPS33AQ96AX1 AC021097.1-201ENST00000607902 574 ntBASIC15.55■□□□□ 0.08
VPS33AQ96AX1 AC004790.2-201ENST00000623588 572 ntBASIC15.55■□□□□ 0.08
VPS33AQ96AX1 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
VPS33AQ96AX1 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
VPS33AQ96AX1 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
VPS33AQ96AX1 TK2-221ENST00000620035 5060 ntTSL 2 BASIC15.55■□□□□ 0.08
VPS33AQ96AX1 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.55■□□□□ 0.08
VPS33AQ96AX1 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VPS33AQ96AX1 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
VPS33AQ96AX1 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.55■□□□□ 0.08
VPS33AQ96AX1 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
VPS33AQ96AX1 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VPS33AQ96AX1 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
VPS33AQ96AX1 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms