Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RFT1Q96AA3 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC14.37□□□□□ -0.11
RFT1Q96AA3 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.37□□□□□ -0.11
RFT1Q96AA3 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC14.37□□□□□ -0.11
RFT1Q96AA3 TPM1-218ENST00000559281 851 ntTSL 5 BASIC14.37□□□□□ -0.11
RFT1Q96AA3 AC091304.2-201ENST00000564639 760 ntBASIC14.37□□□□□ -0.11
RFT1Q96AA3 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RFT1Q96AA3 PRR29-207ENST00000580752 458 ntTSL 3 BASIC14.37□□□□□ -0.11
RFT1Q96AA3 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC14.37□□□□□ -0.11
RFT1Q96AA3 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC14.37□□□□□ -0.11
RFT1Q96AA3 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
RFT1Q96AA3 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC14.37□□□□□ -0.11
RFT1Q96AA3 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.37□□□□□ -0.11
RFT1Q96AA3 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RFT1Q96AA3 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RFT1Q96AA3 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.37□□□□□ -0.11
RFT1Q96AA3 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
RFT1Q96AA3 REXO1L8P-201ENST00000604378 1897 ntBASIC14.37□□□□□ -0.11
RFT1Q96AA3 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC14.37□□□□□ -0.11
RFT1Q96AA3 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.37□□□□□ -0.11
RFT1Q96AA3 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RFT1Q96AA3 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RFT1Q96AA3 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.37□□□□□ -0.11
RFT1Q96AA3 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.37□□□□□ -0.11
RFT1Q96AA3 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RFT1Q96AA3 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.37□□□□□ -0.11
RFT1Q96AA3 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RFT1Q96AA3 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RFT1Q96AA3 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
RFT1Q96AA3 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RFT1Q96AA3 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RFT1Q96AA3 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RFT1Q96AA3 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
RFT1Q96AA3 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RFT1Q96AA3 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC14.36□□□□□ -0.11
RFT1Q96AA3 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RFT1Q96AA3 AC069224.1-201ENST00000566372 1715 ntBASIC14.36□□□□□ -0.11
RFT1Q96AA3 AC006504.4-201ENST00000592118 1568 ntBASIC14.36□□□□□ -0.11
RFT1Q96AA3 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RFT1Q96AA3 AC023908.3-201ENST00000564211 3047 ntBASIC14.36□□□□□ -0.11
RFT1Q96AA3 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC14.36□□□□□ -0.11
RFT1Q96AA3 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RFT1Q96AA3 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC14.36□□□□□ -0.11
RFT1Q96AA3 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
RFT1Q96AA3 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
RFT1Q96AA3 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC14.36□□□□□ -0.11
RFT1Q96AA3 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC14.36□□□□□ -0.11
RFT1Q96AA3 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC14.36□□□□□ -0.11
RFT1Q96AA3 AC004706.3-202ENST00000621574 984 ntBASIC14.36□□□□□ -0.11
RFT1Q96AA3 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC14.36□□□□□ -0.11
RFT1Q96AA3 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RFT1Q96AA3 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
RFT1Q96AA3 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RFT1Q96AA3 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RFT1Q96AA3 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RFT1Q96AA3 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC14.36□□□□□ -0.11
RFT1Q96AA3 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RFT1Q96AA3 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RFT1Q96AA3 AL109954.1-202ENST00000564051 2148 ntBASIC14.36□□□□□ -0.11
RFT1Q96AA3 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RFT1Q96AA3 AC026748.1-201ENST00000624349 3251 ntBASIC14.36□□□□□ -0.11
RFT1Q96AA3 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
RFT1Q96AA3 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
RFT1Q96AA3 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.36□□□□□ -0.11
RFT1Q96AA3 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RFT1Q96AA3 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RFT1Q96AA3 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RFT1Q96AA3 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
RFT1Q96AA3 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
RFT1Q96AA3 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
RFT1Q96AA3 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RFT1Q96AA3 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
RFT1Q96AA3 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.35□□□□□ -0.11
RFT1Q96AA3 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RFT1Q96AA3 AL512652.2-201ENST00000625156 1716 ntBASIC14.35□□□□□ -0.11
RFT1Q96AA3 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
RFT1Q96AA3 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RFT1Q96AA3 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RFT1Q96AA3 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RFT1Q96AA3 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RFT1Q96AA3 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RFT1Q96AA3 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RFT1Q96AA3 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.35□□□□□ -0.11
RFT1Q96AA3 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RFT1Q96AA3 AC136621.1-201ENST00000624017 2304 ntBASIC14.35□□□□□ -0.11
RFT1Q96AA3 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RFT1Q96AA3 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
RFT1Q96AA3 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC14.35□□□□□ -0.11
RFT1Q96AA3 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RFT1Q96AA3 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC14.35□□□□□ -0.11
RFT1Q96AA3 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
RFT1Q96AA3 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC14.35□□□□□ -0.11
RFT1Q96AA3 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC14.35□□□□□ -0.11
RFT1Q96AA3 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC14.35□□□□□ -0.11
RFT1Q96AA3 MPDU1-223ENST00000582151 728 ntBASIC14.35□□□□□ -0.11
RFT1Q96AA3 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC14.35□□□□□ -0.11
RFT1Q96AA3 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RFT1Q96AA3 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC14.35□□□□□ -0.11
RFT1Q96AA3 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RFT1Q96AA3 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms