Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RAB40AQ8WXH6 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RAB40AQ8WXH6 AC006486.2-201ENST00000624246 2199 ntBASIC14.25□□□□□ -0.13
RAB40AQ8WXH6 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB40AQ8WXH6 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RAB40AQ8WXH6 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
RAB40AQ8WXH6 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
RAB40AQ8WXH6 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC14.25□□□□□ -0.13
RAB40AQ8WXH6 PTCHD3P3-201ENST00000403073 906 ntBASIC14.25□□□□□ -0.13
RAB40AQ8WXH6 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB40AQ8WXH6 CRYGEP-201ENST00000412192 528 ntBASIC14.25□□□□□ -0.13
RAB40AQ8WXH6 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC14.25□□□□□ -0.13
RAB40AQ8WXH6 RPP21-221ENST00000428040 594 ntTSL 2 BASIC14.25□□□□□ -0.13
RAB40AQ8WXH6 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB40AQ8WXH6 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC14.25□□□□□ -0.13
RAB40AQ8WXH6 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC14.25□□□□□ -0.13
RAB40AQ8WXH6 IGHV3-65-201ENST00000523210 341 ntBASIC14.25□□□□□ -0.13
RAB40AQ8WXH6 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC14.25□□□□□ -0.13
RAB40AQ8WXH6 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC14.25□□□□□ -0.13
RAB40AQ8WXH6 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC14.25□□□□□ -0.13
RAB40AQ8WXH6 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC14.25□□□□□ -0.13
RAB40AQ8WXH6 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC14.25□□□□□ -0.13
RAB40AQ8WXH6 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC14.25□□□□□ -0.13
RAB40AQ8WXH6 MPDU1-223ENST00000582151 728 ntBASIC14.25□□□□□ -0.13
RAB40AQ8WXH6 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB40AQ8WXH6 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC14.25□□□□□ -0.13
RAB40AQ8WXH6 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB40AQ8WXH6 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.25□□□□□ -0.13
RAB40AQ8WXH6 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.25□□□□□ -0.13
RAB40AQ8WXH6 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
RAB40AQ8WXH6 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB40AQ8WXH6 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB40AQ8WXH6 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RAB40AQ8WXH6 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB40AQ8WXH6 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB40AQ8WXH6 MIR600HG-201ENST00000449175 5984 ntBASIC14.25□□□□□ -0.13
RAB40AQ8WXH6 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.25□□□□□ -0.13
RAB40AQ8WXH6 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB40AQ8WXH6 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RAB40AQ8WXH6 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB40AQ8WXH6 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB40AQ8WXH6 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RAB40AQ8WXH6 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB40AQ8WXH6 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB40AQ8WXH6 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB40AQ8WXH6 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB40AQ8WXH6 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB40AQ8WXH6 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC14.25□□□□□ -0.13
RAB40AQ8WXH6 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RAB40AQ8WXH6 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
RAB40AQ8WXH6 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.24□□□□□ -0.13
RAB40AQ8WXH6 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RAB40AQ8WXH6 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC14.24□□□□□ -0.13
RAB40AQ8WXH6 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB40AQ8WXH6 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
RAB40AQ8WXH6 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.24□□□□□ -0.13
RAB40AQ8WXH6 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
RAB40AQ8WXH6 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RAB40AQ8WXH6 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14.24□□□□□ -0.13
RAB40AQ8WXH6 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.24□□□□□ -0.13
RAB40AQ8WXH6 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.24□□□□□ -0.13
RAB40AQ8WXH6 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC14.24□□□□□ -0.13
RAB40AQ8WXH6 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.24□□□□□ -0.13
RAB40AQ8WXH6 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB40AQ8WXH6 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB40AQ8WXH6 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB40AQ8WXH6 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
RAB40AQ8WXH6 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
RAB40AQ8WXH6 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC14.24□□□□□ -0.13
RAB40AQ8WXH6 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RAB40AQ8WXH6 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB40AQ8WXH6 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC14.24□□□□□ -0.13
RAB40AQ8WXH6 AC007967.2-201ENST00000432613 625 ntBASIC14.24□□□□□ -0.13
RAB40AQ8WXH6 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RAB40AQ8WXH6 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC14.24□□□□□ -0.13
RAB40AQ8WXH6 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC14.24□□□□□ -0.13
RAB40AQ8WXH6 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC14.24□□□□□ -0.13
RAB40AQ8WXH6 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB40AQ8WXH6 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
RAB40AQ8WXH6 AC020658.6-201ENST00000623564 1870 ntBASIC14.24□□□□□ -0.13
RAB40AQ8WXH6 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RAB40AQ8WXH6 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
RAB40AQ8WXH6 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RAB40AQ8WXH6 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
RAB40AQ8WXH6 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
RAB40AQ8WXH6 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB40AQ8WXH6 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RAB40AQ8WXH6 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.24□□□□□ -0.13
RAB40AQ8WXH6 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RAB40AQ8WXH6 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
RAB40AQ8WXH6 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
RAB40AQ8WXH6 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB40AQ8WXH6 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
RAB40AQ8WXH6 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB40AQ8WXH6 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB40AQ8WXH6 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.24□□□□□ -0.13
RAB40AQ8WXH6 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
RAB40AQ8WXH6 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RAB40AQ8WXH6 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB40AQ8WXH6 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms