Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
PTCD2Q8WV60 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
PTCD2Q8WV60 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
PTCD2Q8WV60 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PTCD2Q8WV60 AC008677.1-201ENST00000519230 1561 ntBASIC16.42■□□□□ 0.22
PTCD2Q8WV60 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PTCD2Q8WV60 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.42■□□□□ 0.22
PTCD2Q8WV60 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.42■□□□□ 0.22
PTCD2Q8WV60 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PTCD2Q8WV60 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
PTCD2Q8WV60 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.42■□□□□ 0.22
PTCD2Q8WV60 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PTCD2Q8WV60 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PTCD2Q8WV60 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PTCD2Q8WV60 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
PTCD2Q8WV60 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PTCD2Q8WV60 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
PTCD2Q8WV60 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
PTCD2Q8WV60 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PTCD2Q8WV60 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.41■□□□□ 0.22
PTCD2Q8WV60 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.41■□□□□ 0.22
PTCD2Q8WV60 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.41■□□□□ 0.22
PTCD2Q8WV60 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
PTCD2Q8WV60 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PTCD2Q8WV60 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.41■□□□□ 0.22
PTCD2Q8WV60 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.41■□□□□ 0.22
PTCD2Q8WV60 AC005237.2-201ENST00000434368 219 ntBASIC16.41■□□□□ 0.22
PTCD2Q8WV60 AC023141.5-201ENST00000458585 616 ntBASIC16.41■□□□□ 0.22
PTCD2Q8WV60 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PTCD2Q8WV60 AC087273.1-201ENST00000519368 529 ntTSL 2 BASIC16.41■□□□□ 0.22
PTCD2Q8WV60 FAM86C2P-203ENST00000528684 1004 ntBASIC16.41■□□□□ 0.22
PTCD2Q8WV60 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.41■□□□□ 0.22
PTCD2Q8WV60 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.41■□□□□ 0.22
PTCD2Q8WV60 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.41■□□□□ 0.22
PTCD2Q8WV60 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.41■□□□□ 0.22
PTCD2Q8WV60 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PTCD2Q8WV60 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PTCD2Q8WV60 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PTCD2Q8WV60 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.41■□□□□ 0.22
PTCD2Q8WV60 AKAP8P1-201ENST00000434743 1349 ntBASIC16.41■□□□□ 0.22
PTCD2Q8WV60 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PTCD2Q8WV60 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
PTCD2Q8WV60 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PTCD2Q8WV60 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PTCD2Q8WV60 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PTCD2Q8WV60 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.41■□□□□ 0.22
PTCD2Q8WV60 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.41■□□□□ 0.22
PTCD2Q8WV60 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PTCD2Q8WV60 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
PTCD2Q8WV60 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.4■□□□□ 0.22
PTCD2Q8WV60 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.4■□□□□ 0.22
PTCD2Q8WV60 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
PTCD2Q8WV60 AL589702.1-201ENST00000641229 1509 ntBASIC16.4■□□□□ 0.22
PTCD2Q8WV60 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
PTCD2Q8WV60 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PTCD2Q8WV60 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PTCD2Q8WV60 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PTCD2Q8WV60 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.4■□□□□ 0.22
PTCD2Q8WV60 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PTCD2Q8WV60 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PTCD2Q8WV60 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.4■□□□□ 0.22
PTCD2Q8WV60 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PTCD2Q8WV60 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.4■□□□□ 0.22
PTCD2Q8WV60 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PTCD2Q8WV60 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
PTCD2Q8WV60 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PTCD2Q8WV60 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
PTCD2Q8WV60 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PTCD2Q8WV60 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PTCD2Q8WV60 HAUS4P1-201ENST00000406739 1145 ntBASIC16.4■□□□□ 0.22
PTCD2Q8WV60 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC16.4■□□□□ 0.22
PTCD2Q8WV60 GPS2P2-201ENST00000430745 888 ntBASIC16.4■□□□□ 0.22
PTCD2Q8WV60 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PTCD2Q8WV60 RN7SL589P-201ENST00000481268 310 ntBASIC16.4■□□□□ 0.22
PTCD2Q8WV60 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.4■□□□□ 0.22
PTCD2Q8WV60 PRYP6-201ENST00000514804 343 ntBASIC16.4■□□□□ 0.22
PTCD2Q8WV60 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.4■□□□□ 0.22
PTCD2Q8WV60 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.4■□□□□ 0.22
PTCD2Q8WV60 AL132657.2-201ENST00000564417 358 ntBASIC16.4■□□□□ 0.22
PTCD2Q8WV60 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.4■□□□□ 0.22
PTCD2Q8WV60 AL157762.1-201ENST00000619612 415 ntBASIC16.4■□□□□ 0.22
PTCD2Q8WV60 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.4■□□□□ 0.22
PTCD2Q8WV60 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.4■□□□□ 0.22
PTCD2Q8WV60 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.4■□□□□ 0.22
PTCD2Q8WV60 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.4■□□□□ 0.22
PTCD2Q8WV60 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PTCD2Q8WV60 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.4■□□□□ 0.22
PTCD2Q8WV60 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
PTCD2Q8WV60 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.4■□□□□ 0.22
PTCD2Q8WV60 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PTCD2Q8WV60 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
PTCD2Q8WV60 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
PTCD2Q8WV60 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.4■□□□□ 0.22
PTCD2Q8WV60 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.4■□□□□ 0.22
PTCD2Q8WV60 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
PTCD2Q8WV60 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PTCD2Q8WV60 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PTCD2Q8WV60 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
PTCD2Q8WV60 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTCD2Q8WV60 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms