Protein–RNA interactions for Protein: Q8WUX9

CHMP7, Charged multivesicular body protein 7, humanhuman

Predicted RBP Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP7Q8WUX9 UFM1-202ENST00000379649 846 ntTSL 4 BASIC25.66■■□□□ 1.7
CHMP7Q8WUX9 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
CHMP7Q8WUX9 AL008707.1-201ENST00000422498 534 ntBASIC25.66■■□□□ 1.7
CHMP7Q8WUX9 RNF41-210ENST00000552244 716 ntTSL 3 BASIC25.66■■□□□ 1.7
CHMP7Q8WUX9 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
CHMP7Q8WUX9 MIR3147-201ENST00000577811 66 ntBASIC25.66■■□□□ 1.7
CHMP7Q8WUX9 KLK11-210ENST00000600362 759 ntTSL 3 BASIC25.66■■□□□ 1.7
CHMP7Q8WUX9 AC244157.2-201ENST00000616239 1006 ntBASIC25.66■■□□□ 1.7
CHMP7Q8WUX9 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC25.66■■□□□ 1.7
CHMP7Q8WUX9 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
CHMP7Q8WUX9 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC25.66■■□□□ 1.7
CHMP7Q8WUX9 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
CHMP7Q8WUX9 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
CHMP7Q8WUX9 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC25.66■■□□□ 1.7
CHMP7Q8WUX9 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC25.66■■□□□ 1.7
CHMP7Q8WUX9 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC25.66■■□□□ 1.7
CHMP7Q8WUX9 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
CHMP7Q8WUX9 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
CHMP7Q8WUX9 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
CHMP7Q8WUX9 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CHMP7Q8WUX9 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC25.65■■□□□ 1.7
CHMP7Q8WUX9 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC25.65■■□□□ 1.7
CHMP7Q8WUX9 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CHMP7Q8WUX9 MSRA-203ENST00000441698 788 ntTSL 2 BASIC25.65■■□□□ 1.7
CHMP7Q8WUX9 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CHMP7Q8WUX9 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC25.65■■□□□ 1.7
CHMP7Q8WUX9 AL450472.2-201ENST00000603663 1156 ntBASIC25.65■■□□□ 1.7
CHMP7Q8WUX9 AP000346.4-201ENST00000614827 381 ntBASIC25.65■■□□□ 1.7
CHMP7Q8WUX9 HLA-C-210ENST00000640219 976 ntBASIC25.65■■□□□ 1.7
CHMP7Q8WUX9 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
CHMP7Q8WUX9 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CHMP7Q8WUX9 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CHMP7Q8WUX9 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CHMP7Q8WUX9 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC25.65■■□□□ 1.7
CHMP7Q8WUX9 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC25.65■■□□□ 1.7
CHMP7Q8WUX9 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC25.65■■□□□ 1.7
CHMP7Q8WUX9 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
CHMP7Q8WUX9 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC25.65■■□□□ 1.7
CHMP7Q8WUX9 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC25.64■■□□□ 1.7
CHMP7Q8WUX9 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
CHMP7Q8WUX9 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC25.64■■□□□ 1.7
CHMP7Q8WUX9 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC25.64■■□□□ 1.7
CHMP7Q8WUX9 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
CHMP7Q8WUX9 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC25.64■■□□□ 1.7
CHMP7Q8WUX9 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC25.64■■□□□ 1.7
CHMP7Q8WUX9 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC25.64■■□□□ 1.7
CHMP7Q8WUX9 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC25.64■■□□□ 1.7
CHMP7Q8WUX9 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC25.64■■□□□ 1.7
CHMP7Q8WUX9 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC25.64■■□□□ 1.7
CHMP7Q8WUX9 RN7SL48P-201ENST00000579283 293 ntBASIC25.64■■□□□ 1.7
CHMP7Q8WUX9 AC097359.3-201ENST00000603982 1210 ntBASIC25.64■■□□□ 1.7
CHMP7Q8WUX9 AC008132.1-202ENST00000342005 1389 ntBASIC25.64■■□□□ 1.69
CHMP7Q8WUX9 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC25.64■■□□□ 1.69
CHMP7Q8WUX9 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
CHMP7Q8WUX9 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
CHMP7Q8WUX9 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
CHMP7Q8WUX9 OS9-205ENST00000413095 1660 ntTSL 2 BASIC25.64■■□□□ 1.69
CHMP7Q8WUX9 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC25.64■■□□□ 1.69
CHMP7Q8WUX9 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
CHMP7Q8WUX9 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CHMP7Q8WUX9 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CHMP7Q8WUX9 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC25.63■■□□□ 1.69
CHMP7Q8WUX9 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC25.63■■□□□ 1.69
CHMP7Q8WUX9 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CHMP7Q8WUX9 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CHMP7Q8WUX9 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CHMP7Q8WUX9 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC25.63■■□□□ 1.69
CHMP7Q8WUX9 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC25.63■■□□□ 1.69
CHMP7Q8WUX9 NUP210P1-202ENST00000504322 710 ntBASIC25.63■■□□□ 1.69
CHMP7Q8WUX9 AC024681.1-201ENST00000521917 487 ntBASIC25.63■■□□□ 1.69
CHMP7Q8WUX9 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CHMP7Q8WUX9 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CHMP7Q8WUX9 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC25.63■■□□□ 1.69
CHMP7Q8WUX9 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CHMP7Q8WUX9 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC25.63■■□□□ 1.69
CHMP7Q8WUX9 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC25.63■■□□□ 1.69
CHMP7Q8WUX9 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC25.63■■□□□ 1.69
CHMP7Q8WUX9 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC25.63■■□□□ 1.69
CHMP7Q8WUX9 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CHMP7Q8WUX9 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC25.63■■□□□ 1.69
CHMP7Q8WUX9 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
CHMP7Q8WUX9 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
CHMP7Q8WUX9 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
CHMP7Q8WUX9 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CHMP7Q8WUX9 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CHMP7Q8WUX9 AC087289.5-201ENST00000586076 3175 ntBASIC25.63■■□□□ 1.69
CHMP7Q8WUX9 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CHMP7Q8WUX9 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CHMP7Q8WUX9 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CHMP7Q8WUX9 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC25.63■■□□□ 1.69
CHMP7Q8WUX9 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC25.63■■□□□ 1.69
CHMP7Q8WUX9 GATB-213ENST00000515812 1893 ntTSL 5 BASIC25.62■■□□□ 1.69
CHMP7Q8WUX9 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC25.62■■□□□ 1.69
CHMP7Q8WUX9 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC25.62■■□□□ 1.69
CHMP7Q8WUX9 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC25.62■■□□□ 1.69
CHMP7Q8WUX9 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC25.62■■□□□ 1.69
CHMP7Q8WUX9 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC25.62■■□□□ 1.69
CHMP7Q8WUX9 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CHMP7Q8WUX9 CD276-203ENST00000537340 2439 ntTSL 2 BASIC25.62■■□□□ 1.69
CHMP7Q8WUX9 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms