Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC18.97■□□□□ 0.63
NKX2-3Q8TAU0 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC18.97■□□□□ 0.63
NKX2-3Q8TAU0 AL589739.1-201ENST00000607720 493 ntBASIC18.97■□□□□ 0.63
NKX2-3Q8TAU0 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC18.97■□□□□ 0.63
NKX2-3Q8TAU0 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC18.97■□□□□ 0.63
NKX2-3Q8TAU0 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NKX2-3Q8TAU0 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC18.97■□□□□ 0.63
NKX2-3Q8TAU0 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC18.97■□□□□ 0.63
NKX2-3Q8TAU0 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
NKX2-3Q8TAU0 AC132872.4-202ENST00000622924 2756 ntBASIC18.97■□□□□ 0.63
NKX2-3Q8TAU0 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
NKX2-3Q8TAU0 FUK-207ENST00000571514 3054 ntTSL 2 BASIC18.97■□□□□ 0.63
NKX2-3Q8TAU0 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NKX2-3Q8TAU0 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NKX2-3Q8TAU0 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC18.96■□□□□ 0.63
NKX2-3Q8TAU0 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NKX2-3Q8TAU0 AL139384.1-201ENST00000612143 3047 ntBASIC18.96■□□□□ 0.63
NKX2-3Q8TAU0 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC18.96■□□□□ 0.63
NKX2-3Q8TAU0 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
NKX2-3Q8TAU0 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
NKX2-3Q8TAU0 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
NKX2-3Q8TAU0 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC18.96■□□□□ 0.63
NKX2-3Q8TAU0 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NKX2-3Q8TAU0 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NKX2-3Q8TAU0 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC18.96■□□□□ 0.63
NKX2-3Q8TAU0 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NKX2-3Q8TAU0 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
NKX2-3Q8TAU0 AZGP1P1-201ENST00000411909 902 ntBASIC18.96■□□□□ 0.63
NKX2-3Q8TAU0 RAD18-204ENST00000418463 563 ntTSL 4 BASIC18.96■□□□□ 0.63
NKX2-3Q8TAU0 RAD18-205ENST00000421052 582 ntTSL 3 BASIC18.96■□□□□ 0.63
NKX2-3Q8TAU0 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC18.96■□□□□ 0.63
NKX2-3Q8TAU0 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC18.96■□□□□ 0.63
NKX2-3Q8TAU0 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC18.96■□□□□ 0.63
NKX2-3Q8TAU0 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC18.96■□□□□ 0.63
NKX2-3Q8TAU0 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC18.96■□□□□ 0.63
NKX2-3Q8TAU0 KRT17P8-201ENST00000540749 863 ntBASIC18.96■□□□□ 0.63
NKX2-3Q8TAU0 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
NKX2-3Q8TAU0 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
NKX2-3Q8TAU0 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
NKX2-3Q8TAU0 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NKX2-3Q8TAU0 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC18.96■□□□□ 0.63
NKX2-3Q8TAU0 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NKX2-3Q8TAU0 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
NKX2-3Q8TAU0 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NKX2-3Q8TAU0 AGK-211ENST00000629555 2765 ntTSL 5 BASIC18.96■□□□□ 0.63
NKX2-3Q8TAU0 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NKX2-3Q8TAU0 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
NKX2-3Q8TAU0 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NKX2-3Q8TAU0 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NKX2-3Q8TAU0 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
NKX2-3Q8TAU0 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC18.96■□□□□ 0.63
NKX2-3Q8TAU0 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.62
NKX2-3Q8TAU0 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NKX2-3Q8TAU0 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.95■□□□□ 0.62
NKX2-3Q8TAU0 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NKX2-3Q8TAU0 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC18.95■□□□□ 0.62
NKX2-3Q8TAU0 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NKX2-3Q8TAU0 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NKX2-3Q8TAU0 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC18.95■□□□□ 0.62
NKX2-3Q8TAU0 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NKX2-3Q8TAU0 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NKX2-3Q8TAU0 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NKX2-3Q8TAU0 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
NKX2-3Q8TAU0 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
NKX2-3Q8TAU0 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
NKX2-3Q8TAU0 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NKX2-3Q8TAU0 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NKX2-3Q8TAU0 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
NKX2-3Q8TAU0 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NKX2-3Q8TAU0 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
NKX2-3Q8TAU0 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NKX2-3Q8TAU0 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
NKX2-3Q8TAU0 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
NKX2-3Q8TAU0 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC18.95■□□□□ 0.62
NKX2-3Q8TAU0 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NKX2-3Q8TAU0 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC18.95■□□□□ 0.62
NKX2-3Q8TAU0 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
NKX2-3Q8TAU0 STOM-203ENST00000538954 1257 ntTSL 5 BASIC18.95■□□□□ 0.62
NKX2-3Q8TAU0 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC18.95■□□□□ 0.62
NKX2-3Q8TAU0 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC18.95■□□□□ 0.62
NKX2-3Q8TAU0 PRR29-204ENST00000577953 565 ntTSL 4 BASIC18.95■□□□□ 0.62
NKX2-3Q8TAU0 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC18.95■□□□□ 0.62
NKX2-3Q8TAU0 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC18.95■□□□□ 0.62
NKX2-3Q8TAU0 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NKX2-3Q8TAU0 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC18.95■□□□□ 0.62
NKX2-3Q8TAU0 SNX12-206ENST00000622259 661 ntTSL 5 BASIC18.95■□□□□ 0.62
NKX2-3Q8TAU0 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NKX2-3Q8TAU0 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC18.95■□□□□ 0.62
NKX2-3Q8TAU0 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NKX2-3Q8TAU0 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC18.95■□□□□ 0.62
NKX2-3Q8TAU0 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
NKX2-3Q8TAU0 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
NKX2-3Q8TAU0 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
NKX2-3Q8TAU0 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NKX2-3Q8TAU0 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NKX2-3Q8TAU0 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NKX2-3Q8TAU0 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC18.94■□□□□ 0.62
NKX2-3Q8TAU0 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
NKX2-3Q8TAU0 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
NKX2-3Q8TAU0 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms