Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLDND2Q8NHS1 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLDND2Q8NHS1 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC13.77□□□□□ -0.21
CLDND2Q8NHS1 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC13.77□□□□□ -0.21
CLDND2Q8NHS1 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLDND2Q8NHS1 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
CLDND2Q8NHS1 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLDND2Q8NHS1 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
CLDND2Q8NHS1 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
CLDND2Q8NHS1 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC13.77□□□□□ -0.21
CLDND2Q8NHS1 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC13.77□□□□□ -0.21
CLDND2Q8NHS1 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CLDND2Q8NHS1 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CLDND2Q8NHS1 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC13.77□□□□□ -0.21
CLDND2Q8NHS1 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC13.77□□□□□ -0.21
CLDND2Q8NHS1 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CLDND2Q8NHS1 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC13.77□□□□□ -0.21
CLDND2Q8NHS1 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC13.77□□□□□ -0.21
CLDND2Q8NHS1 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC13.77□□□□□ -0.21
CLDND2Q8NHS1 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLDND2Q8NHS1 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
CLDND2Q8NHS1 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC13.77□□□□□ -0.21
CLDND2Q8NHS1 AC138761.1-201ENST00000584393 385 ntBASIC13.77□□□□□ -0.21
CLDND2Q8NHS1 AC003101.2-201ENST00000612557 442 ntBASIC13.77□□□□□ -0.21
CLDND2Q8NHS1 AC018529.1-201ENST00000613063 361 ntBASIC13.77□□□□□ -0.21
CLDND2Q8NHS1 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC13.77□□□□□ -0.21
CLDND2Q8NHS1 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC13.77□□□□□ -0.21
CLDND2Q8NHS1 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLDND2Q8NHS1 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLDND2Q8NHS1 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLDND2Q8NHS1 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CLDND2Q8NHS1 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLDND2Q8NHS1 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLDND2Q8NHS1 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLDND2Q8NHS1 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLDND2Q8NHS1 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC13.76□□□□□ -0.21
CLDND2Q8NHS1 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
CLDND2Q8NHS1 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC13.76□□□□□ -0.21
CLDND2Q8NHS1 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CLDND2Q8NHS1 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC13.76□□□□□ -0.21
CLDND2Q8NHS1 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CLDND2Q8NHS1 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLDND2Q8NHS1 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLDND2Q8NHS1 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLDND2Q8NHS1 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLDND2Q8NHS1 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC13.76□□□□□ -0.21
CLDND2Q8NHS1 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLDND2Q8NHS1 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
CLDND2Q8NHS1 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
CLDND2Q8NHS1 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CLDND2Q8NHS1 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CLDND2Q8NHS1 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC13.76□□□□□ -0.21
CLDND2Q8NHS1 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
CLDND2Q8NHS1 OVCH1-AS1-204ENST00000641955 5529 ntBASIC13.76□□□□□ -0.21
CLDND2Q8NHS1 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CLDND2Q8NHS1 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC13.76□□□□□ -0.21
CLDND2Q8NHS1 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC13.76□□□□□ -0.21
CLDND2Q8NHS1 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC13.76□□□□□ -0.21
CLDND2Q8NHS1 AL512638.1-201ENST00000457493 794 ntBASIC13.76□□□□□ -0.21
CLDND2Q8NHS1 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC13.76□□□□□ -0.21
CLDND2Q8NHS1 AC097493.3-201ENST00000509725 367 ntBASIC13.76□□□□□ -0.21
CLDND2Q8NHS1 RPS15-212ENST00000593052 629 ntTSL 2 BASIC13.76□□□□□ -0.21
CLDND2Q8NHS1 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC13.76□□□□□ -0.21
CLDND2Q8NHS1 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CLDND2Q8NHS1 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC13.76□□□□□ -0.21
CLDND2Q8NHS1 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
CLDND2Q8NHS1 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLDND2Q8NHS1 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CLDND2Q8NHS1 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
CLDND2Q8NHS1 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLDND2Q8NHS1 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLDND2Q8NHS1 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLDND2Q8NHS1 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
CLDND2Q8NHS1 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC13.76□□□□□ -0.21
CLDND2Q8NHS1 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLDND2Q8NHS1 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLDND2Q8NHS1 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLDND2Q8NHS1 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLDND2Q8NHS1 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CLDND2Q8NHS1 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLDND2Q8NHS1 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
CLDND2Q8NHS1 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
CLDND2Q8NHS1 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
CLDND2Q8NHS1 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
CLDND2Q8NHS1 AC092364.2-201ENST00000596710 2692 ntBASIC13.76□□□□□ -0.21
CLDND2Q8NHS1 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CLDND2Q8NHS1 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
CLDND2Q8NHS1 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC13.75□□□□□ -0.21
CLDND2Q8NHS1 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLDND2Q8NHS1 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC13.75□□□□□ -0.21
CLDND2Q8NHS1 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
CLDND2Q8NHS1 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CLDND2Q8NHS1 KRT8P39-201ENST00000396270 1433 ntBASIC13.75□□□□□ -0.21
CLDND2Q8NHS1 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLDND2Q8NHS1 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLDND2Q8NHS1 DBET-201ENST00000630918 3363 ntBASIC13.75□□□□□ -0.21
CLDND2Q8NHS1 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC13.75□□□□□ -0.21
CLDND2Q8NHS1 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLDND2Q8NHS1 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CLDND2Q8NHS1 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms