Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC18.6■□□□□ 0.57
CCDC148Q8NFR7 CNN2P3-201ENST00000450201 906 ntBASIC18.6■□□□□ 0.57
CCDC148Q8NFR7 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC18.6■□□□□ 0.57
CCDC148Q8NFR7 AL139010.1-201ENST00000454878 894 ntBASIC18.6■□□□□ 0.57
CCDC148Q8NFR7 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC18.6■□□□□ 0.57
CCDC148Q8NFR7 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC148Q8NFR7 LSM12-202ENST00000585388 942 ntTSL 3 BASIC18.6■□□□□ 0.57
CCDC148Q8NFR7 AC003101.2-201ENST00000612557 442 ntBASIC18.6■□□□□ 0.57
CCDC148Q8NFR7 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC148Q8NFR7 AL136317.3-201ENST00000618497 906 ntBASIC18.6■□□□□ 0.57
CCDC148Q8NFR7 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC18.6■□□□□ 0.57
CCDC148Q8NFR7 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CCDC148Q8NFR7 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC18.6■□□□□ 0.57
CCDC148Q8NFR7 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC148Q8NFR7 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC148Q8NFR7 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CCDC148Q8NFR7 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC18.6■□□□□ 0.57
CCDC148Q8NFR7 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC18.6■□□□□ 0.57
CCDC148Q8NFR7 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC148Q8NFR7 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
CCDC148Q8NFR7 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC148Q8NFR7 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
CCDC148Q8NFR7 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC18.6■□□□□ 0.57
CCDC148Q8NFR7 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC148Q8NFR7 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
CCDC148Q8NFR7 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
CCDC148Q8NFR7 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC148Q8NFR7 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC148Q8NFR7 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC148Q8NFR7 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC148Q8NFR7 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC148Q8NFR7 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC148Q8NFR7 PGR-209ENST00000617858 2816 ntTSL 5 BASIC18.59■□□□□ 0.57
CCDC148Q8NFR7 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC18.59■□□□□ 0.57
CCDC148Q8NFR7 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC18.59■□□□□ 0.57
CCDC148Q8NFR7 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC148Q8NFR7 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC148Q8NFR7 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC148Q8NFR7 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC18.59■□□□□ 0.57
CCDC148Q8NFR7 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC148Q8NFR7 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CCDC148Q8NFR7 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC148Q8NFR7 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC148Q8NFR7 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC148Q8NFR7 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC148Q8NFR7 KRT18P28-201ENST00000453838 1332 ntBASIC18.59■□□□□ 0.57
CCDC148Q8NFR7 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC148Q8NFR7 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CCDC148Q8NFR7 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC148Q8NFR7 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
CCDC148Q8NFR7 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
CCDC148Q8NFR7 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC148Q8NFR7 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC18.59■□□□□ 0.57
CCDC148Q8NFR7 METTL21AP1-201ENST00000438852 635 ntBASIC18.59■□□□□ 0.57
CCDC148Q8NFR7 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC18.59■□□□□ 0.57
CCDC148Q8NFR7 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC18.59■□□□□ 0.57
CCDC148Q8NFR7 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC18.59■□□□□ 0.57
CCDC148Q8NFR7 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC148Q8NFR7 VPS29-207ENST00000549970 818 ntTSL 3 BASIC18.59■□□□□ 0.57
CCDC148Q8NFR7 AC243562.2-201ENST00000561247 970 ntBASIC18.59■□□□□ 0.57
CCDC148Q8NFR7 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC18.59■□□□□ 0.57
CCDC148Q8NFR7 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC18.59■□□□□ 0.57
CCDC148Q8NFR7 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CCDC148Q8NFR7 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC148Q8NFR7 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC148Q8NFR7 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC148Q8NFR7 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC18.59■□□□□ 0.57
CCDC148Q8NFR7 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CCDC148Q8NFR7 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC148Q8NFR7 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC148Q8NFR7 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC148Q8NFR7 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC148Q8NFR7 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC148Q8NFR7 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC148Q8NFR7 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CCDC148Q8NFR7 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CCDC148Q8NFR7 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC148Q8NFR7 BLK-205ENST00000529894 2017 ntTSL 5 BASIC18.59■□□□□ 0.57
CCDC148Q8NFR7 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC148Q8NFR7 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC148Q8NFR7 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC148Q8NFR7 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CCDC148Q8NFR7 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
CCDC148Q8NFR7 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
CCDC148Q8NFR7 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
CCDC148Q8NFR7 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC18.58■□□□□ 0.57
CCDC148Q8NFR7 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CCDC148Q8NFR7 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
CCDC148Q8NFR7 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CCDC148Q8NFR7 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CCDC148Q8NFR7 AL035456.1-201ENST00000456064 1369 ntBASIC18.58■□□□□ 0.57
CCDC148Q8NFR7 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC18.58■□□□□ 0.57
CCDC148Q8NFR7 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC18.58■□□□□ 0.57
CCDC148Q8NFR7 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CCDC148Q8NFR7 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
CCDC148Q8NFR7 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC18.58■□□□□ 0.57
CCDC148Q8NFR7 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC148Q8NFR7 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC148Q8NFR7 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
CCDC148Q8NFR7 LBH-203ENST00000404397 543 ntTSL 4 BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms