Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC19.7■□□□□ 0.74
RTL9Q8NET4 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC19.7■□□□□ 0.74
RTL9Q8NET4 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC19.7■□□□□ 0.74
RTL9Q8NET4 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
RTL9Q8NET4 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RTL9Q8NET4 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
RTL9Q8NET4 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
RTL9Q8NET4 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RTL9Q8NET4 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RTL9Q8NET4 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RTL9Q8NET4 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
RTL9Q8NET4 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RTL9Q8NET4 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RTL9Q8NET4 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RTL9Q8NET4 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RTL9Q8NET4 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC19.7■□□□□ 0.74
RTL9Q8NET4 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
RTL9Q8NET4 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
RTL9Q8NET4 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RTL9Q8NET4 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
RTL9Q8NET4 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RTL9Q8NET4 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC19.7■□□□□ 0.74
RTL9Q8NET4 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC19.7■□□□□ 0.74
RTL9Q8NET4 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RTL9Q8NET4 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC19.7■□□□□ 0.74
RTL9Q8NET4 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RTL9Q8NET4 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
RTL9Q8NET4 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RTL9Q8NET4 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC19.7■□□□□ 0.74
RTL9Q8NET4 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC19.7■□□□□ 0.74
RTL9Q8NET4 KRT18P64-201ENST00000434946 1219 ntBASIC19.7■□□□□ 0.74
RTL9Q8NET4 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC19.7■□□□□ 0.74
RTL9Q8NET4 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC19.7■□□□□ 0.74
RTL9Q8NET4 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC19.7■□□□□ 0.74
RTL9Q8NET4 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC19.7■□□□□ 0.74
RTL9Q8NET4 ORC6-206ENST00000568364 888 ntTSL 5 BASIC19.7■□□□□ 0.74
RTL9Q8NET4 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC19.7■□□□□ 0.74
RTL9Q8NET4 AL450472.2-201ENST00000603663 1156 ntBASIC19.7■□□□□ 0.74
RTL9Q8NET4 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RTL9Q8NET4 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC19.69■□□□□ 0.74
RTL9Q8NET4 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC19.69■□□□□ 0.74
RTL9Q8NET4 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RTL9Q8NET4 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RTL9Q8NET4 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC19.69■□□□□ 0.74
RTL9Q8NET4 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC19.69■□□□□ 0.74
RTL9Q8NET4 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RTL9Q8NET4 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC19.69■□□□□ 0.74
RTL9Q8NET4 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
RTL9Q8NET4 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RTL9Q8NET4 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC19.69■□□□□ 0.74
RTL9Q8NET4 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
RTL9Q8NET4 AC006449.6-201ENST00000612330 2296 ntBASIC19.69■□□□□ 0.74
RTL9Q8NET4 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
RTL9Q8NET4 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC19.69■□□□□ 0.74
RTL9Q8NET4 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RTL9Q8NET4 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RTL9Q8NET4 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RTL9Q8NET4 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RTL9Q8NET4 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RTL9Q8NET4 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
RTL9Q8NET4 MIR648-201ENST00000385046 94 ntBASIC19.69■□□□□ 0.74
RTL9Q8NET4 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RTL9Q8NET4 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC19.69■□□□□ 0.74
RTL9Q8NET4 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC19.69■□□□□ 0.74
RTL9Q8NET4 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC19.69■□□□□ 0.74
RTL9Q8NET4 AC104596.2-201ENST00000512793 793 ntBASIC19.69■□□□□ 0.74
RTL9Q8NET4 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC19.69■□□□□ 0.74
RTL9Q8NET4 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
RTL9Q8NET4 PAM16-204ENST00000571941 674 ntTSL 3 BASIC19.69■□□□□ 0.74
RTL9Q8NET4 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RTL9Q8NET4 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RTL9Q8NET4 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RTL9Q8NET4 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC19.68■□□□□ 0.74
RTL9Q8NET4 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC19.68■□□□□ 0.74
RTL9Q8NET4 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RTL9Q8NET4 AMT-232ENST00000636199 1546 ntTSL 5 BASIC19.68■□□□□ 0.74
RTL9Q8NET4 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RTL9Q8NET4 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RTL9Q8NET4 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RTL9Q8NET4 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RTL9Q8NET4 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RTL9Q8NET4 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RTL9Q8NET4 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC19.68■□□□□ 0.74
RTL9Q8NET4 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RTL9Q8NET4 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RTL9Q8NET4 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RTL9Q8NET4 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RTL9Q8NET4 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RTL9Q8NET4 ANKRD19P-201ENST00000338192 862 ntBASIC19.68■□□□□ 0.74
RTL9Q8NET4 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
RTL9Q8NET4 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RTL9Q8NET4 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RTL9Q8NET4 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RTL9Q8NET4 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC19.68■□□□□ 0.74
RTL9Q8NET4 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RTL9Q8NET4 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC19.68■□□□□ 0.74
RTL9Q8NET4 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC19.68■□□□□ 0.74
RTL9Q8NET4 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC19.68■□□□□ 0.74
RTL9Q8NET4 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC19.68■□□□□ 0.74
RTL9Q8NET4 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms