Protein–RNA interactions for Protein: Q8N668

COMMD1, COMM domain-containing protein 1, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1Q8N668 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
COMMD1Q8N668 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
COMMD1Q8N668 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
COMMD1Q8N668 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
COMMD1Q8N668 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
COMMD1Q8N668 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
COMMD1Q8N668 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC13.49□□□□□ -0.25
COMMD1Q8N668 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
COMMD1Q8N668 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
COMMD1Q8N668 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
COMMD1Q8N668 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
COMMD1Q8N668 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
COMMD1Q8N668 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
COMMD1Q8N668 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
COMMD1Q8N668 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC13.49□□□□□ -0.25
COMMD1Q8N668 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
COMMD1Q8N668 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC13.49□□□□□ -0.25
COMMD1Q8N668 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
COMMD1Q8N668 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
COMMD1Q8N668 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC13.49□□□□□ -0.25
COMMD1Q8N668 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC13.49□□□□□ -0.25
COMMD1Q8N668 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC13.49□□□□□ -0.25
COMMD1Q8N668 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC13.49□□□□□ -0.25
COMMD1Q8N668 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
COMMD1Q8N668 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC13.49□□□□□ -0.25
COMMD1Q8N668 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
COMMD1Q8N668 AC009947.1-201ENST00000444350 727 ntBASIC13.49□□□□□ -0.25
COMMD1Q8N668 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
COMMD1Q8N668 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC13.49□□□□□ -0.25
COMMD1Q8N668 CD63-210ENST00000550776 870 ntTSL 5 BASIC13.49□□□□□ -0.25
COMMD1Q8N668 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
COMMD1Q8N668 AC034105.1-201ENST00000563488 319 ntBASIC13.49□□□□□ -0.25
COMMD1Q8N668 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
COMMD1Q8N668 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
COMMD1Q8N668 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
COMMD1Q8N668 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
COMMD1Q8N668 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC13.49□□□□□ -0.25
COMMD1Q8N668 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
COMMD1Q8N668 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC13.49□□□□□ -0.25
COMMD1Q8N668 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC13.49□□□□□ -0.25
COMMD1Q8N668 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC13.49□□□□□ -0.25
COMMD1Q8N668 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
COMMD1Q8N668 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
COMMD1Q8N668 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC13.49□□□□□ -0.25
COMMD1Q8N668 AC006504.4-201ENST00000592118 1568 ntBASIC13.49□□□□□ -0.25
COMMD1Q8N668 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
COMMD1Q8N668 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
COMMD1Q8N668 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
COMMD1Q8N668 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
COMMD1Q8N668 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC13.49□□□□□ -0.25
COMMD1Q8N668 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
COMMD1Q8N668 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
COMMD1Q8N668 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
COMMD1Q8N668 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
COMMD1Q8N668 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
COMMD1Q8N668 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
COMMD1Q8N668 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
COMMD1Q8N668 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC13.48□□□□□ -0.25
COMMD1Q8N668 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
COMMD1Q8N668 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC13.48□□□□□ -0.25
COMMD1Q8N668 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
COMMD1Q8N668 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
COMMD1Q8N668 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
COMMD1Q8N668 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
COMMD1Q8N668 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
COMMD1Q8N668 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
COMMD1Q8N668 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
COMMD1Q8N668 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
COMMD1Q8N668 AL135999.2-201ENST00000622438 1686 ntBASIC13.48□□□□□ -0.25
COMMD1Q8N668 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
COMMD1Q8N668 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
COMMD1Q8N668 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
COMMD1Q8N668 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
COMMD1Q8N668 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
COMMD1Q8N668 MRPL20P1-201ENST00000400819 433 ntBASIC13.48□□□□□ -0.25
COMMD1Q8N668 CRYGEP-201ENST00000412192 528 ntBASIC13.48□□□□□ -0.25
COMMD1Q8N668 CRCP-205ENST00000431089 942 ntTSL 2 BASIC13.48□□□□□ -0.25
COMMD1Q8N668 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC13.48□□□□□ -0.25
COMMD1Q8N668 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
COMMD1Q8N668 HS6ST1P1-201ENST00000481504 1234 ntBASIC13.48□□□□□ -0.25
COMMD1Q8N668 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC13.48□□□□□ -0.25
COMMD1Q8N668 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC13.48□□□□□ -0.25
COMMD1Q8N668 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC13.48□□□□□ -0.25
COMMD1Q8N668 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC13.48□□□□□ -0.25
COMMD1Q8N668 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC13.48□□□□□ -0.25
COMMD1Q8N668 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC13.48□□□□□ -0.25
COMMD1Q8N668 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
COMMD1Q8N668 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
COMMD1Q8N668 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
COMMD1Q8N668 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC13.48□□□□□ -0.25
COMMD1Q8N668 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
COMMD1Q8N668 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC13.48□□□□□ -0.25
COMMD1Q8N668 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC13.48□□□□□ -0.25
COMMD1Q8N668 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
COMMD1Q8N668 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
COMMD1Q8N668 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC13.48□□□□□ -0.25
COMMD1Q8N668 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
COMMD1Q8N668 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
COMMD1Q8N668 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
COMMD1Q8N668 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms