Protein–RNA interactions for Protein: Q8N2S1

LTBP4, Latent-transforming growth factor beta-binding protein 4, humanhuman

Predictions only

Length 1,624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4Q8N2S1 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC21.7■■□□□ 1.07
LTBP4Q8N2S1 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC21.7■■□□□ 1.06
LTBP4Q8N2S1 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC21.7■■□□□ 1.06
LTBP4Q8N2S1 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
LTBP4Q8N2S1 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LTBP4Q8N2S1 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LTBP4Q8N2S1 UROS-201ENST00000368774 744 ntTSL 2 BASIC21.7■■□□□ 1.06
LTBP4Q8N2S1 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC21.7■■□□□ 1.06
LTBP4Q8N2S1 LINC01056-201ENST00000455711 1234 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
LTBP4Q8N2S1 TPM1-223ENST00000560445 485 ntTSL 3 BASIC21.7■■□□□ 1.06
LTBP4Q8N2S1 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC21.7■■□□□ 1.06
LTBP4Q8N2S1 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC21.7■■□□□ 1.06
LTBP4Q8N2S1 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LTBP4Q8N2S1 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
LTBP4Q8N2S1 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC21.7■■□□□ 1.06
LTBP4Q8N2S1 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC21.7■■□□□ 1.06
LTBP4Q8N2S1 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC21.7■■□□□ 1.06
LTBP4Q8N2S1 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC21.69■■□□□ 1.06
LTBP4Q8N2S1 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC21.69■■□□□ 1.06
LTBP4Q8N2S1 SNORD3B-2-202ENST00000571722 791 ntBASIC21.69■■□□□ 1.06
LTBP4Q8N2S1 PAM16-211ENST00000575848 518 ntTSL 3 BASIC21.69■■□□□ 1.06
LTBP4Q8N2S1 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
LTBP4Q8N2S1 PTPN20CP-201ENST00000614090 920 ntBASIC21.69■■□□□ 1.06
LTBP4Q8N2S1 AL136295.7-201ENST00000619226 1200 ntBASIC21.69■■□□□ 1.06
LTBP4Q8N2S1 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LTBP4Q8N2S1 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
LTBP4Q8N2S1 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC21.69■■□□□ 1.06
LTBP4Q8N2S1 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC21.69■■□□□ 1.06
LTBP4Q8N2S1 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
LTBP4Q8N2S1 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC21.69■■□□□ 1.06
LTBP4Q8N2S1 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LTBP4Q8N2S1 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
LTBP4Q8N2S1 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LTBP4Q8N2S1 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
LTBP4Q8N2S1 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
LTBP4Q8N2S1 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC21.69■■□□□ 1.06
LTBP4Q8N2S1 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC21.69■■□□□ 1.06
LTBP4Q8N2S1 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC21.69■■□□□ 1.06
LTBP4Q8N2S1 NAP1L6-202ENST00000641404 1222 ntBASIC21.69■■□□□ 1.06
LTBP4Q8N2S1 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LTBP4Q8N2S1 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
LTBP4Q8N2S1 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
LTBP4Q8N2S1 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC21.69■■□□□ 1.06
LTBP4Q8N2S1 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LTBP4Q8N2S1 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
LTBP4Q8N2S1 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LTBP4Q8N2S1 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC21.68■■□□□ 1.06
LTBP4Q8N2S1 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LTBP4Q8N2S1 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC21.68■■□□□ 1.06
LTBP4Q8N2S1 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC21.68■■□□□ 1.06
LTBP4Q8N2S1 COX20P1-201ENST00000366529 357 ntBASIC21.68■■□□□ 1.06
LTBP4Q8N2S1 AC024293.1-201ENST00000467930 498 ntBASIC21.68■■□□□ 1.06
LTBP4Q8N2S1 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC21.68■■□□□ 1.06
LTBP4Q8N2S1 AC006158.1-201ENST00000610661 249 ntBASIC21.68■■□□□ 1.06
LTBP4Q8N2S1 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LTBP4Q8N2S1 AL138688.1-201ENST00000624851 1594 ntBASIC21.68■■□□□ 1.06
LTBP4Q8N2S1 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
LTBP4Q8N2S1 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LTBP4Q8N2S1 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC21.68■■□□□ 1.06
LTBP4Q8N2S1 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
LTBP4Q8N2S1 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
LTBP4Q8N2S1 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
LTBP4Q8N2S1 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
LTBP4Q8N2S1 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC21.67■■□□□ 1.06
LTBP4Q8N2S1 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
LTBP4Q8N2S1 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
LTBP4Q8N2S1 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC21.67■■□□□ 1.06
LTBP4Q8N2S1 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
LTBP4Q8N2S1 BCAS2P2-201ENST00000425064 674 ntBASIC21.67■■□□□ 1.06
LTBP4Q8N2S1 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC21.67■■□□□ 1.06
LTBP4Q8N2S1 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC21.67■■□□□ 1.06
LTBP4Q8N2S1 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC21.67■■□□□ 1.06
LTBP4Q8N2S1 RN7SL258P-201ENST00000478664 300 ntBASIC21.67■■□□□ 1.06
LTBP4Q8N2S1 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC21.67■■□□□ 1.06
LTBP4Q8N2S1 AC005618.3-201ENST00000624928 458 ntBASIC21.67■■□□□ 1.06
LTBP4Q8N2S1 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
LTBP4Q8N2S1 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LTBP4Q8N2S1 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC21.67■■□□□ 1.06
LTBP4Q8N2S1 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LTBP4Q8N2S1 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LTBP4Q8N2S1 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC21.67■■□□□ 1.06
LTBP4Q8N2S1 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
LTBP4Q8N2S1 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC21.66■■□□□ 1.06
LTBP4Q8N2S1 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
LTBP4Q8N2S1 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LTBP4Q8N2S1 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC21.66■■□□□ 1.06
LTBP4Q8N2S1 RN7SL396P-201ENST00000471086 295 ntBASIC21.66■■□□□ 1.06
LTBP4Q8N2S1 AC026803.1-201ENST00000569130 274 ntBASIC21.66■■□□□ 1.06
LTBP4Q8N2S1 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC21.66■■□□□ 1.06
LTBP4Q8N2S1 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC21.66■■□□□ 1.06
LTBP4Q8N2S1 AC009955.4-201ENST00000597192 544 ntBASIC21.66■■□□□ 1.06
LTBP4Q8N2S1 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC21.66■■□□□ 1.06
LTBP4Q8N2S1 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
LTBP4Q8N2S1 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
LTBP4Q8N2S1 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
LTBP4Q8N2S1 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
LTBP4Q8N2S1 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LTBP4Q8N2S1 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LTBP4Q8N2S1 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
LTBP4Q8N2S1 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms