Protein–RNA interactions for Protein: Q86WT1

TTC30A, Tetratricopeptide repeat protein 30A, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC30AQ86WT1 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC17.11■□□□□ 0.33
TTC30AQ86WT1 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TTC30AQ86WT1 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC17.11■□□□□ 0.33
TTC30AQ86WT1 AL390955.2-201ENST00000603032 514 ntBASIC17.11■□□□□ 0.33
TTC30AQ86WT1 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TTC30AQ86WT1 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC17.11■□□□□ 0.33
TTC30AQ86WT1 TUBB3P1-201ENST00000405796 1332 ntBASIC17.11■□□□□ 0.33
TTC30AQ86WT1 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
TTC30AQ86WT1 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
TTC30AQ86WT1 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
TTC30AQ86WT1 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
TTC30AQ86WT1 LINC02199-201ENST00000506655 2702 ntBASIC17.11■□□□□ 0.33
TTC30AQ86WT1 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TTC30AQ86WT1 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
TTC30AQ86WT1 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
TTC30AQ86WT1 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
TTC30AQ86WT1 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
TTC30AQ86WT1 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TTC30AQ86WT1 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TTC30AQ86WT1 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TTC30AQ86WT1 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TTC30AQ86WT1 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TTC30AQ86WT1 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.1■□□□□ 0.33
TTC30AQ86WT1 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TTC30AQ86WT1 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
TTC30AQ86WT1 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TTC30AQ86WT1 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
TTC30AQ86WT1 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TTC30AQ86WT1 AC026691.1-201ENST00000602502 2017 ntBASIC17.1■□□□□ 0.33
TTC30AQ86WT1 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TTC30AQ86WT1 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC17.1■□□□□ 0.33
TTC30AQ86WT1 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TTC30AQ86WT1 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TTC30AQ86WT1 BASP1P1-201ENST00000430708 665 ntBASIC17.1■□□□□ 0.33
TTC30AQ86WT1 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
TTC30AQ86WT1 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC17.1■□□□□ 0.33
TTC30AQ86WT1 AC125807.1-201ENST00000483097 614 ntBASIC17.1■□□□□ 0.33
TTC30AQ86WT1 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TTC30AQ86WT1 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC17.1■□□□□ 0.33
TTC30AQ86WT1 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC17.1■□□□□ 0.33
TTC30AQ86WT1 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC17.1■□□□□ 0.33
TTC30AQ86WT1 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC17.1■□□□□ 0.33
TTC30AQ86WT1 PAM16-215ENST00000577031 548 ntTSL 4 BASIC17.1■□□□□ 0.33
TTC30AQ86WT1 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TTC30AQ86WT1 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC17.1■□□□□ 0.33
TTC30AQ86WT1 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TTC30AQ86WT1 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TTC30AQ86WT1 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TTC30AQ86WT1 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC17.1■□□□□ 0.33
TTC30AQ86WT1 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TTC30AQ86WT1 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC17.1■□□□□ 0.33
TTC30AQ86WT1 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC17.1■□□□□ 0.33
TTC30AQ86WT1 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TTC30AQ86WT1 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC17.1■□□□□ 0.33
TTC30AQ86WT1 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
TTC30AQ86WT1 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
TTC30AQ86WT1 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TTC30AQ86WT1 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TTC30AQ86WT1 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TTC30AQ86WT1 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TTC30AQ86WT1 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TTC30AQ86WT1 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TTC30AQ86WT1 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
TTC30AQ86WT1 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
TTC30AQ86WT1 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC17.09■□□□□ 0.33
TTC30AQ86WT1 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TTC30AQ86WT1 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
TTC30AQ86WT1 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
TTC30AQ86WT1 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
TTC30AQ86WT1 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
TTC30AQ86WT1 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.09■□□□□ 0.33
TTC30AQ86WT1 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TTC30AQ86WT1 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TTC30AQ86WT1 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
TTC30AQ86WT1 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TTC30AQ86WT1 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
TTC30AQ86WT1 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TTC30AQ86WT1 MIR648-201ENST00000385046 94 ntBASIC17.09■□□□□ 0.33
TTC30AQ86WT1 WRB-204ENST00000398753 699 ntTSL 3 BASIC17.09■□□□□ 0.33
TTC30AQ86WT1 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC17.09■□□□□ 0.33
TTC30AQ86WT1 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC17.09■□□□□ 0.33
TTC30AQ86WT1 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC17.09■□□□□ 0.33
TTC30AQ86WT1 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC17.09■□□□□ 0.33
TTC30AQ86WT1 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC17.09■□□□□ 0.33
TTC30AQ86WT1 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC17.09■□□□□ 0.33
TTC30AQ86WT1 AL133215.2-201ENST00000609242 977 ntBASIC17.09■□□□□ 0.33
TTC30AQ86WT1 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TTC30AQ86WT1 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TTC30AQ86WT1 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TTC30AQ86WT1 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TTC30AQ86WT1 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC17.09■□□□□ 0.33
TTC30AQ86WT1 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TTC30AQ86WT1 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TTC30AQ86WT1 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
TTC30AQ86WT1 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC17.09■□□□□ 0.33
TTC30AQ86WT1 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TTC30AQ86WT1 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TTC30AQ86WT1 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.09■□□□□ 0.33
TTC30AQ86WT1 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TTC30AQ86WT1 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms