Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.05□□□□□ -0.16
LRRTM1Q86UE6 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.05□□□□□ -0.16
LRRTM1Q86UE6 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
LRRTM1Q86UE6 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.05□□□□□ -0.16
LRRTM1Q86UE6 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LRRTM1Q86UE6 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LRRTM1Q86UE6 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
LRRTM1Q86UE6 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LRRTM1Q86UE6 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.05□□□□□ -0.16
LRRTM1Q86UE6 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.05□□□□□ -0.16
LRRTM1Q86UE6 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
LRRTM1Q86UE6 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LRRTM1Q86UE6 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LRRTM1Q86UE6 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LRRTM1Q86UE6 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
LRRTM1Q86UE6 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LRRTM1Q86UE6 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LRRTM1Q86UE6 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC14.05□□□□□ -0.16
LRRTM1Q86UE6 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
LRRTM1Q86UE6 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC14.05□□□□□ -0.16
LRRTM1Q86UE6 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
LRRTM1Q86UE6 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
LRRTM1Q86UE6 AC136632.2-201ENST00000512891 861 ntBASIC14.05□□□□□ -0.16
LRRTM1Q86UE6 IGHV3-65-201ENST00000523210 341 ntBASIC14.05□□□□□ -0.16
LRRTM1Q86UE6 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LRRTM1Q86UE6 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC14.05□□□□□ -0.16
LRRTM1Q86UE6 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC14.05□□□□□ -0.16
LRRTM1Q86UE6 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC14.05□□□□□ -0.16
LRRTM1Q86UE6 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC14.05□□□□□ -0.16
LRRTM1Q86UE6 AL031055.1-201ENST00000606362 631 ntBASIC14.05□□□□□ -0.16
LRRTM1Q86UE6 ACTL9-202ENST00000612068 1252 ntBASIC14.05□□□□□ -0.16
LRRTM1Q86UE6 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC14.05□□□□□ -0.16
LRRTM1Q86UE6 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC14.05□□□□□ -0.16
LRRTM1Q86UE6 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
LRRTM1Q86UE6 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
LRRTM1Q86UE6 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LRRTM1Q86UE6 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
LRRTM1Q86UE6 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LRRTM1Q86UE6 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.05□□□□□ -0.16
LRRTM1Q86UE6 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.05□□□□□ -0.16
LRRTM1Q86UE6 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LRRTM1Q86UE6 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LRRTM1Q86UE6 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.05□□□□□ -0.16
LRRTM1Q86UE6 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
LRRTM1Q86UE6 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
LRRTM1Q86UE6 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
LRRTM1Q86UE6 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LRRTM1Q86UE6 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LRRTM1Q86UE6 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LRRTM1Q86UE6 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
LRRTM1Q86UE6 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC14.05□□□□□ -0.16
LRRTM1Q86UE6 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LRRTM1Q86UE6 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LRRTM1Q86UE6 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
LRRTM1Q86UE6 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LRRTM1Q86UE6 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LRRTM1Q86UE6 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LRRTM1Q86UE6 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.04□□□□□ -0.16
LRRTM1Q86UE6 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LRRTM1Q86UE6 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.04□□□□□ -0.16
LRRTM1Q86UE6 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
LRRTM1Q86UE6 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LRRTM1Q86UE6 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC14.04□□□□□ -0.16
LRRTM1Q86UE6 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LRRTM1Q86UE6 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.04□□□□□ -0.16
LRRTM1Q86UE6 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LRRTM1Q86UE6 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LRRTM1Q86UE6 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
LRRTM1Q86UE6 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
LRRTM1Q86UE6 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LRRTM1Q86UE6 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LRRTM1Q86UE6 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LRRTM1Q86UE6 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LRRTM1Q86UE6 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
LRRTM1Q86UE6 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LRRTM1Q86UE6 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
LRRTM1Q86UE6 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LRRTM1Q86UE6 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LRRTM1Q86UE6 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LRRTM1Q86UE6 HMGA1P7-201ENST00000406908 502 ntBASIC14.04□□□□□ -0.16
LRRTM1Q86UE6 AC245100.5-201ENST00000452108 331 ntBASIC14.04□□□□□ -0.16
LRRTM1Q86UE6 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC14.04□□□□□ -0.16
LRRTM1Q86UE6 KRT18P31-201ENST00000506277 1292 ntBASIC14.04□□□□□ -0.16
LRRTM1Q86UE6 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC14.04□□□□□ -0.16
LRRTM1Q86UE6 OR7E47P-204ENST00000575924 449 ntBASIC14.04□□□□□ -0.16
LRRTM1Q86UE6 MIR3909-201ENST00000579518 119 ntBASIC14.04□□□□□ -0.16
LRRTM1Q86UE6 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LRRTM1Q86UE6 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC14.04□□□□□ -0.16
LRRTM1Q86UE6 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC14.04□□□□□ -0.16
LRRTM1Q86UE6 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LRRTM1Q86UE6 AL365209.1-201ENST00000624418 6473 ntBASIC14.04□□□□□ -0.16
LRRTM1Q86UE6 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LRRTM1Q86UE6 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LRRTM1Q86UE6 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
LRRTM1Q86UE6 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
LRRTM1Q86UE6 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC14.04□□□□□ -0.16
LRRTM1Q86UE6 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
LRRTM1Q86UE6 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
LRRTM1Q86UE6 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LRRTM1Q86UE6 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms