Protein–RNA interactions for Protein: Q6P3S1

DENND1B, DENN domain-containing protein 1B, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND1BQ6P3S1 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
DENND1BQ6P3S1 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
DENND1BQ6P3S1 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
DENND1BQ6P3S1 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
DENND1BQ6P3S1 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
DENND1BQ6P3S1 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
DENND1BQ6P3S1 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
DENND1BQ6P3S1 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC17.04■□□□□ 0.32
DENND1BQ6P3S1 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
DENND1BQ6P3S1 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
DENND1BQ6P3S1 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.04■□□□□ 0.32
DENND1BQ6P3S1 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
DENND1BQ6P3S1 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
DENND1BQ6P3S1 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
DENND1BQ6P3S1 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
DENND1BQ6P3S1 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC17.04■□□□□ 0.32
DENND1BQ6P3S1 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC17.04■□□□□ 0.32
DENND1BQ6P3S1 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
DENND1BQ6P3S1 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
DENND1BQ6P3S1 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC17.04■□□□□ 0.32
DENND1BQ6P3S1 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
DENND1BQ6P3S1 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.04■□□□□ 0.32
DENND1BQ6P3S1 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
DENND1BQ6P3S1 CYP4F24P-201ENST00000586049 1580 ntBASIC17.04■□□□□ 0.32
DENND1BQ6P3S1 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
DENND1BQ6P3S1 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
DENND1BQ6P3S1 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
DENND1BQ6P3S1 AL139010.1-201ENST00000454878 894 ntBASIC17.04■□□□□ 0.32
DENND1BQ6P3S1 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
DENND1BQ6P3S1 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC17.04■□□□□ 0.32
DENND1BQ6P3S1 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC17.04■□□□□ 0.32
DENND1BQ6P3S1 AC243562.2-201ENST00000561247 970 ntBASIC17.04■□□□□ 0.32
DENND1BQ6P3S1 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC17.04■□□□□ 0.32
DENND1BQ6P3S1 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC17.04■□□□□ 0.32
DENND1BQ6P3S1 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
DENND1BQ6P3S1 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC17.04■□□□□ 0.32
DENND1BQ6P3S1 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
DENND1BQ6P3S1 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
DENND1BQ6P3S1 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
DENND1BQ6P3S1 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC17.04■□□□□ 0.32
DENND1BQ6P3S1 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
DENND1BQ6P3S1 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
DENND1BQ6P3S1 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
DENND1BQ6P3S1 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
DENND1BQ6P3S1 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.04■□□□□ 0.32
DENND1BQ6P3S1 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
DENND1BQ6P3S1 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
DENND1BQ6P3S1 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
DENND1BQ6P3S1 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC17.03■□□□□ 0.32
DENND1BQ6P3S1 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
DENND1BQ6P3S1 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
DENND1BQ6P3S1 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
DENND1BQ6P3S1 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
DENND1BQ6P3S1 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC17.03■□□□□ 0.32
DENND1BQ6P3S1 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
DENND1BQ6P3S1 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
DENND1BQ6P3S1 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC17.03■□□□□ 0.32
DENND1BQ6P3S1 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
DENND1BQ6P3S1 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
DENND1BQ6P3S1 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
DENND1BQ6P3S1 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC17.03■□□□□ 0.32
DENND1BQ6P3S1 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC17.03■□□□□ 0.32
DENND1BQ6P3S1 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
DENND1BQ6P3S1 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC17.03■□□□□ 0.32
DENND1BQ6P3S1 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC17.03■□□□□ 0.32
DENND1BQ6P3S1 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC17.03■□□□□ 0.32
DENND1BQ6P3S1 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC17.03■□□□□ 0.32
DENND1BQ6P3S1 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC17.03■□□□□ 0.32
DENND1BQ6P3S1 AC069262.1-201ENST00000539058 672 ntBASIC17.03■□□□□ 0.32
DENND1BQ6P3S1 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC17.03■□□□□ 0.32
DENND1BQ6P3S1 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC17.03■□□□□ 0.32
DENND1BQ6P3S1 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
DENND1BQ6P3S1 AC007967.4-201ENST00000614700 386 ntBASIC17.03■□□□□ 0.32
DENND1BQ6P3S1 AC093028.1-201ENST00000622998 982 ntBASIC17.03■□□□□ 0.32
DENND1BQ6P3S1 Z92544.3-201ENST00000624747 417 ntBASIC17.03■□□□□ 0.32
DENND1BQ6P3S1 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
DENND1BQ6P3S1 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC17.03■□□□□ 0.32
DENND1BQ6P3S1 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.03■□□□□ 0.32
DENND1BQ6P3S1 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
DENND1BQ6P3S1 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
DENND1BQ6P3S1 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC17.03■□□□□ 0.32
DENND1BQ6P3S1 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
DENND1BQ6P3S1 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC17.03■□□□□ 0.32
DENND1BQ6P3S1 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
DENND1BQ6P3S1 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
DENND1BQ6P3S1 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
DENND1BQ6P3S1 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC17.03■□□□□ 0.32
DENND1BQ6P3S1 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
DENND1BQ6P3S1 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
DENND1BQ6P3S1 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
DENND1BQ6P3S1 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
DENND1BQ6P3S1 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
DENND1BQ6P3S1 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
DENND1BQ6P3S1 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
DENND1BQ6P3S1 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
DENND1BQ6P3S1 ZBTB45P2-201ENST00000452245 1531 ntBASIC17.02■□□□□ 0.32
DENND1BQ6P3S1 AP005117.1-202ENST00000581724 1908 ntBASIC17.02■□□□□ 0.32
DENND1BQ6P3S1 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
DENND1BQ6P3S1 PRAL-201ENST00000624952 3286 ntBASIC17.02■□□□□ 0.32
DENND1BQ6P3S1 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms