Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 COPE-202ENST00000349893 948 ntTSL 2 BASIC14.92□□□□□ -0.02
H3F3CQ6NXT2 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
H3F3CQ6NXT2 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.92□□□□□ -0.02
H3F3CQ6NXT2 CRB3P1-201ENST00000449338 276 ntBASIC14.92□□□□□ -0.02
H3F3CQ6NXT2 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC14.92□□□□□ -0.02
H3F3CQ6NXT2 RN7SL618P-201ENST00000477850 296 ntBASIC14.92□□□□□ -0.02
H3F3CQ6NXT2 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.92□□□□□ -0.02
H3F3CQ6NXT2 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC14.92□□□□□ -0.02
H3F3CQ6NXT2 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
H3F3CQ6NXT2 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC14.92□□□□□ -0.02
H3F3CQ6NXT2 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
H3F3CQ6NXT2 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
H3F3CQ6NXT2 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC14.92□□□□□ -0.02
H3F3CQ6NXT2 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC14.92□□□□□ -0.02
H3F3CQ6NXT2 AF228730.6-201ENST00000641497 218 ntBASIC14.92□□□□□ -0.02
H3F3CQ6NXT2 AC084121.3-201ENST00000641716 218 ntBASIC14.92□□□□□ -0.02
H3F3CQ6NXT2 AC105233.6-201ENST00000642093 218 ntBASIC14.92□□□□□ -0.02
H3F3CQ6NXT2 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.92□□□□□ -0.02
H3F3CQ6NXT2 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.92□□□□□ -0.02
H3F3CQ6NXT2 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
H3F3CQ6NXT2 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.92□□□□□ -0.02
H3F3CQ6NXT2 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
H3F3CQ6NXT2 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
H3F3CQ6NXT2 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
H3F3CQ6NXT2 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
H3F3CQ6NXT2 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC14.92□□□□□ -0.02
H3F3CQ6NXT2 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
H3F3CQ6NXT2 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
H3F3CQ6NXT2 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
H3F3CQ6NXT2 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
H3F3CQ6NXT2 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
H3F3CQ6NXT2 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
H3F3CQ6NXT2 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
H3F3CQ6NXT2 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
H3F3CQ6NXT2 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC14.92□□□□□ -0.02
H3F3CQ6NXT2 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC14.92□□□□□ -0.02
H3F3CQ6NXT2 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
H3F3CQ6NXT2 IMPDH1P4-201ENST00000445028 1534 ntBASIC14.92□□□□□ -0.02
H3F3CQ6NXT2 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
H3F3CQ6NXT2 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
H3F3CQ6NXT2 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC14.91□□□□□ -0.02
H3F3CQ6NXT2 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
H3F3CQ6NXT2 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
H3F3CQ6NXT2 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
H3F3CQ6NXT2 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC14.91□□□□□ -0.02
H3F3CQ6NXT2 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
H3F3CQ6NXT2 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC14.91□□□□□ -0.02
H3F3CQ6NXT2 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC14.91□□□□□ -0.02
H3F3CQ6NXT2 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
H3F3CQ6NXT2 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
H3F3CQ6NXT2 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
H3F3CQ6NXT2 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC14.91□□□□□ -0.02
H3F3CQ6NXT2 TSPY26P-202ENST00000565928 3884 ntBASIC14.91□□□□□ -0.02
H3F3CQ6NXT2 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
H3F3CQ6NXT2 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
H3F3CQ6NXT2 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
H3F3CQ6NXT2 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
H3F3CQ6NXT2 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC14.91□□□□□ -0.02
H3F3CQ6NXT2 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
H3F3CQ6NXT2 CALY-202ENST00000368555 783 ntTSL 2 BASIC14.91□□□□□ -0.02
H3F3CQ6NXT2 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
H3F3CQ6NXT2 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC14.91□□□□□ -0.02
H3F3CQ6NXT2 AC245100.5-201ENST00000452108 331 ntBASIC14.91□□□□□ -0.02
H3F3CQ6NXT2 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
H3F3CQ6NXT2 SPDYE22P-201ENST00000582158 798 ntBASIC14.91□□□□□ -0.02
H3F3CQ6NXT2 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC14.91□□□□□ -0.02
H3F3CQ6NXT2 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
H3F3CQ6NXT2 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
H3F3CQ6NXT2 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
H3F3CQ6NXT2 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
H3F3CQ6NXT2 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
H3F3CQ6NXT2 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
H3F3CQ6NXT2 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
H3F3CQ6NXT2 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
H3F3CQ6NXT2 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
H3F3CQ6NXT2 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
H3F3CQ6NXT2 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
H3F3CQ6NXT2 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
H3F3CQ6NXT2 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
H3F3CQ6NXT2 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
H3F3CQ6NXT2 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC14.91□□□□□ -0.02
H3F3CQ6NXT2 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
H3F3CQ6NXT2 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC14.9□□□□□ -0.02
H3F3CQ6NXT2 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
H3F3CQ6NXT2 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
H3F3CQ6NXT2 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
H3F3CQ6NXT2 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
H3F3CQ6NXT2 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
H3F3CQ6NXT2 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC14.9□□□□□ -0.02
H3F3CQ6NXT2 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC14.9□□□□□ -0.02
H3F3CQ6NXT2 PGR-209ENST00000617858 2816 ntTSL 5 BASIC14.9□□□□□ -0.02
H3F3CQ6NXT2 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
H3F3CQ6NXT2 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
H3F3CQ6NXT2 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
H3F3CQ6NXT2 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
H3F3CQ6NXT2 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC14.9□□□□□ -0.02
H3F3CQ6NXT2 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
H3F3CQ6NXT2 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.9□□□□□ -0.02
H3F3CQ6NXT2 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
H3F3CQ6NXT2 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms