Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
RNFT1Q5M7Z0 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
RNFT1Q5M7Z0 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
RNFT1Q5M7Z0 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
RNFT1Q5M7Z0 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
RNFT1Q5M7Z0 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.46□□□□□ -0.09
RNFT1Q5M7Z0 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC14.46□□□□□ -0.09
RNFT1Q5M7Z0 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RNFT1Q5M7Z0 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RNFT1Q5M7Z0 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14.46□□□□□ -0.09
RNFT1Q5M7Z0 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
RNFT1Q5M7Z0 AC079328.2-201ENST00000561241 3354 ntBASIC14.46□□□□□ -0.09
RNFT1Q5M7Z0 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RNFT1Q5M7Z0 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RNFT1Q5M7Z0 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RNFT1Q5M7Z0 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
RNFT1Q5M7Z0 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
RNFT1Q5M7Z0 MXI1-205ENST00000393134 889 ntTSL 2 BASIC14.46□□□□□ -0.09
RNFT1Q5M7Z0 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC14.46□□□□□ -0.09
RNFT1Q5M7Z0 AC074338.1-201ENST00000416825 156 ntBASIC14.46□□□□□ -0.09
RNFT1Q5M7Z0 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC14.46□□□□□ -0.09
RNFT1Q5M7Z0 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC14.46□□□□□ -0.09
RNFT1Q5M7Z0 RN7SL837P-201ENST00000463010 287 ntBASIC14.46□□□□□ -0.09
RNFT1Q5M7Z0 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC14.46□□□□□ -0.09
RNFT1Q5M7Z0 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC14.46□□□□□ -0.09
RNFT1Q5M7Z0 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RNFT1Q5M7Z0 HILS1-202ENST00000545329 423 ntBASIC14.46□□□□□ -0.09
RNFT1Q5M7Z0 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
RNFT1Q5M7Z0 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC14.46□□□□□ -0.09
RNFT1Q5M7Z0 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
RNFT1Q5M7Z0 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
RNFT1Q5M7Z0 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC14.46□□□□□ -0.09
RNFT1Q5M7Z0 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC14.46□□□□□ -0.09
RNFT1Q5M7Z0 AC093726.1-201ENST00000608064 963 ntBASIC14.46□□□□□ -0.09
RNFT1Q5M7Z0 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
RNFT1Q5M7Z0 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC14.46□□□□□ -0.09
RNFT1Q5M7Z0 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
RNFT1Q5M7Z0 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RNFT1Q5M7Z0 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RNFT1Q5M7Z0 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RNFT1Q5M7Z0 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RNFT1Q5M7Z0 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC14.46□□□□□ -0.09
RNFT1Q5M7Z0 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC14.46□□□□□ -0.1
RNFT1Q5M7Z0 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
RNFT1Q5M7Z0 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
RNFT1Q5M7Z0 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
RNFT1Q5M7Z0 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
RNFT1Q5M7Z0 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC14.46□□□□□ -0.1
RNFT1Q5M7Z0 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
RNFT1Q5M7Z0 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
RNFT1Q5M7Z0 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
RNFT1Q5M7Z0 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC14.46□□□□□ -0.1
RNFT1Q5M7Z0 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
RNFT1Q5M7Z0 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RNFT1Q5M7Z0 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RNFT1Q5M7Z0 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RNFT1Q5M7Z0 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RNFT1Q5M7Z0 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
RNFT1Q5M7Z0 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.45□□□□□ -0.1
RNFT1Q5M7Z0 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RNFT1Q5M7Z0 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
RNFT1Q5M7Z0 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC14.45□□□□□ -0.1
RNFT1Q5M7Z0 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RNFT1Q5M7Z0 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RNFT1Q5M7Z0 AC007274.1-201ENST00000439805 662 ntBASIC14.45□□□□□ -0.1
RNFT1Q5M7Z0 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RNFT1Q5M7Z0 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC14.45□□□□□ -0.1
RNFT1Q5M7Z0 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RNFT1Q5M7Z0 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC14.45□□□□□ -0.1
RNFT1Q5M7Z0 AC011495.1-201ENST00000498085 584 ntBASIC14.45□□□□□ -0.1
RNFT1Q5M7Z0 GLI4-203ENST00000517468 963 ntTSL 5 BASIC14.45□□□□□ -0.1
RNFT1Q5M7Z0 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.45□□□□□ -0.1
RNFT1Q5M7Z0 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
RNFT1Q5M7Z0 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
RNFT1Q5M7Z0 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.45□□□□□ -0.1
RNFT1Q5M7Z0 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC14.45□□□□□ -0.1
RNFT1Q5M7Z0 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC14.45□□□□□ -0.1
RNFT1Q5M7Z0 RARRES2P5-201ENST00000564013 466 ntBASIC14.45□□□□□ -0.1
RNFT1Q5M7Z0 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
RNFT1Q5M7Z0 AC092068.1-201ENST00000592525 454 ntTSL 2 BASIC14.45□□□□□ -0.1
RNFT1Q5M7Z0 WFDC1-204ENST00000613603 549 ntBASIC14.45□□□□□ -0.1
RNFT1Q5M7Z0 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC14.45□□□□□ -0.1
RNFT1Q5M7Z0 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
RNFT1Q5M7Z0 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RNFT1Q5M7Z0 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RNFT1Q5M7Z0 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
RNFT1Q5M7Z0 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RNFT1Q5M7Z0 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
RNFT1Q5M7Z0 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RNFT1Q5M7Z0 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RNFT1Q5M7Z0 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RNFT1Q5M7Z0 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.45□□□□□ -0.1
RNFT1Q5M7Z0 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RNFT1Q5M7Z0 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
RNFT1Q5M7Z0 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RNFT1Q5M7Z0 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
RNFT1Q5M7Z0 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC14.44□□□□□ -0.1
RNFT1Q5M7Z0 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
RNFT1Q5M7Z0 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RNFT1Q5M7Z0 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms