Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC27Q2M243 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC27Q2M243 TREML5P-201ENST00000421694 576 ntBASIC20.88■□□□□ 0.93
CCDC27Q2M243 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC27Q2M243 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC20.88■□□□□ 0.93
CCDC27Q2M243 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
CCDC27Q2M243 AC010336.2-201ENST00000564226 506 ntBASIC20.88■□□□□ 0.93
CCDC27Q2M243 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC27Q2M243 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC20.88■□□□□ 0.93
CCDC27Q2M243 AL844908.2-201ENST00000609461 460 ntBASIC20.88■□□□□ 0.93
CCDC27Q2M243 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
CCDC27Q2M243 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC27Q2M243 Z97205.2-201ENST00000564697 1639 ntBASIC20.88■□□□□ 0.93
CCDC27Q2M243 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC27Q2M243 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC27Q2M243 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC20.88■□□□□ 0.93
CCDC27Q2M243 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC27Q2M243 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC27Q2M243 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC27Q2M243 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC27Q2M243 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC27Q2M243 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC27Q2M243 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC20.88■□□□□ 0.93
CCDC27Q2M243 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC20.88■□□□□ 0.93
CCDC27Q2M243 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC27Q2M243 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
CCDC27Q2M243 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CCDC27Q2M243 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC27Q2M243 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC27Q2M243 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC27Q2M243 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CCDC27Q2M243 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC27Q2M243 VMA21-202ENST00000370361 693 ntTSL 5 BASIC20.87■□□□□ 0.93
CCDC27Q2M243 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC27Q2M243 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC27Q2M243 AC055876.3-201ENST00000431496 288 ntBASIC20.87■□□□□ 0.93
CCDC27Q2M243 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC27Q2M243 SERBP1P3-201ENST00000459980 809 ntBASIC20.87■□□□□ 0.93
CCDC27Q2M243 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC20.87■□□□□ 0.93
CCDC27Q2M243 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC20.87■□□□□ 0.93
CCDC27Q2M243 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC27Q2M243 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC20.87■□□□□ 0.93
CCDC27Q2M243 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC20.87■□□□□ 0.93
CCDC27Q2M243 AC138649.4-201ENST00000612222 287 ntBASIC20.87■□□□□ 0.93
CCDC27Q2M243 AL590560.3-201ENST00000623350 461 ntBASIC20.87■□□□□ 0.93
CCDC27Q2M243 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC20.87■□□□□ 0.93
CCDC27Q2M243 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC27Q2M243 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
CCDC27Q2M243 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
CCDC27Q2M243 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC27Q2M243 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC27Q2M243 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC27Q2M243 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC27Q2M243 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC27Q2M243 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC27Q2M243 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
CCDC27Q2M243 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC27Q2M243 AC100757.3-201ENST00000622361 1406 ntBASIC20.87■□□□□ 0.93
CCDC27Q2M243 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC27Q2M243 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC27Q2M243 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC20.86■□□□□ 0.93
CCDC27Q2M243 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
CCDC27Q2M243 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC27Q2M243 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC20.86■□□□□ 0.93
CCDC27Q2M243 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC20.86■□□□□ 0.93
CCDC27Q2M243 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC27Q2M243 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC27Q2M243 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
CCDC27Q2M243 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC20.86■□□□□ 0.93
CCDC27Q2M243 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC20.86■□□□□ 0.93
CCDC27Q2M243 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC27Q2M243 MIR943-201ENST00000401286 94 ntBASIC20.86■□□□□ 0.93
CCDC27Q2M243 CENPM-205ENST00000404067 905 ntTSL 3 BASIC20.86■□□□□ 0.93
CCDC27Q2M243 CENPM-206ENST00000407253 818 ntTSL 2 BASIC20.86■□□□□ 0.93
CCDC27Q2M243 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC20.86■□□□□ 0.93
CCDC27Q2M243 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC20.86■□□□□ 0.93
CCDC27Q2M243 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC20.86■□□□□ 0.93
CCDC27Q2M243 AC027369.6-201ENST00000525520 931 ntBASIC20.86■□□□□ 0.93
CCDC27Q2M243 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC27Q2M243 MPI-209ENST00000564003 1195 ntTSL 2 BASIC20.86■□□□□ 0.93
CCDC27Q2M243 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC20.86■□□□□ 0.93
CCDC27Q2M243 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC20.86■□□□□ 0.93
CCDC27Q2M243 AC025048.3-201ENST00000590609 569 ntBASIC20.86■□□□□ 0.93
CCDC27Q2M243 AC005702.4-201ENST00000618393 416 ntBASIC20.86■□□□□ 0.93
CCDC27Q2M243 MIR6069-201ENST00000620069 79 ntBASIC20.86■□□□□ 0.93
CCDC27Q2M243 RAB34-223ENST00000636154 730 ntTSL 2 BASIC20.86■□□□□ 0.93
CCDC27Q2M243 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC27Q2M243 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC27Q2M243 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC27Q2M243 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC27Q2M243 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC27Q2M243 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CCDC27Q2M243 VILL-207ENST00000465644 1857 ntTSL 5 BASIC20.86■□□□□ 0.93
CCDC27Q2M243 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
CCDC27Q2M243 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC27Q2M243 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC20.86■□□□□ 0.93
CCDC27Q2M243 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC27Q2M243 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC27Q2M243 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC20.85■□□□□ 0.93
CCDC27Q2M243 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms