Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
H3F3AP84243 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC14.44□□□□□ -0.1
H3F3AP84243 CDC14C-201ENST00000428251 1719 ntBASIC14.44□□□□□ -0.1
H3F3AP84243 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
H3F3AP84243 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC14.43□□□□□ -0.1
H3F3AP84243 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
H3F3AP84243 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
H3F3AP84243 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
H3F3AP84243 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
H3F3AP84243 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
H3F3AP84243 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
H3F3AP84243 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
H3F3AP84243 OVCH1-AS1-204ENST00000641955 5529 ntBASIC14.43□□□□□ -0.1
H3F3AP84243 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
H3F3AP84243 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
H3F3AP84243 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
H3F3AP84243 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
H3F3AP84243 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
H3F3AP84243 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
H3F3AP84243 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
H3F3AP84243 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.43□□□□□ -0.1
H3F3AP84243 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.43□□□□□ -0.1
H3F3AP84243 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
H3F3AP84243 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.43□□□□□ -0.1
H3F3AP84243 LBH-203ENST00000404397 543 ntTSL 4 BASIC14.43□□□□□ -0.1
H3F3AP84243 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
H3F3AP84243 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC14.43□□□□□ -0.1
H3F3AP84243 AL139010.1-201ENST00000454878 894 ntBASIC14.43□□□□□ -0.1
H3F3AP84243 AC105021.1-202ENST00000570572 669 ntBASIC14.43□□□□□ -0.1
H3F3AP84243 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.43□□□□□ -0.1
H3F3AP84243 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.43□□□□□ -0.1
H3F3AP84243 COQ4-205ENST00000609948 956 ntTSL 2 BASIC14.43□□□□□ -0.1
H3F3AP84243 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
H3F3AP84243 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
H3F3AP84243 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC14.43□□□□□ -0.1
H3F3AP84243 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
H3F3AP84243 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
H3F3AP84243 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
H3F3AP84243 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
H3F3AP84243 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
H3F3AP84243 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
H3F3AP84243 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
H3F3AP84243 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.43□□□□□ -0.1
H3F3AP84243 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
H3F3AP84243 AL035456.1-201ENST00000456064 1369 ntBASIC14.43□□□□□ -0.1
H3F3AP84243 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14.43□□□□□ -0.1
H3F3AP84243 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC14.43□□□□□ -0.1
H3F3AP84243 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
H3F3AP84243 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
H3F3AP84243 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.43□□□□□ -0.1
H3F3AP84243 PCDHA1-201ENST00000378133 2726 ntBASIC14.43□□□□□ -0.1
H3F3AP84243 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
H3F3AP84243 KRT18P28-201ENST00000453838 1332 ntBASIC14.42□□□□□ -0.1
H3F3AP84243 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC14.42□□□□□ -0.1
H3F3AP84243 LINC02447-202ENST00000501888 2146 ntBASIC14.42□□□□□ -0.1
H3F3AP84243 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
H3F3AP84243 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
H3F3AP84243 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
H3F3AP84243 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.42□□□□□ -0.1
H3F3AP84243 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC14.42□□□□□ -0.1
H3F3AP84243 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
H3F3AP84243 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
H3F3AP84243 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC14.42□□□□□ -0.1
H3F3AP84243 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
H3F3AP84243 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
H3F3AP84243 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
H3F3AP84243 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.42□□□□□ -0.1
H3F3AP84243 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
H3F3AP84243 AL136982.4-201ENST00000437689 1740 ntBASIC14.42□□□□□ -0.1
H3F3AP84243 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
H3F3AP84243 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
H3F3AP84243 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
H3F3AP84243 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
H3F3AP84243 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
H3F3AP84243 AC004987.2-201ENST00000395959 1148 ntBASIC14.42□□□□□ -0.1
H3F3AP84243 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC14.42□□□□□ -0.1
H3F3AP84243 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC14.42□□□□□ -0.1
H3F3AP84243 SLBP-205ENST00000488267 987 ntTSL 2 BASIC14.42□□□□□ -0.1
H3F3AP84243 LITAF-210ENST00000571976 548 ntTSL 2 BASIC14.42□□□□□ -0.1
H3F3AP84243 LITAF-214ENST00000574703 486 ntTSL 2 BASIC14.42□□□□□ -0.1
H3F3AP84243 MIR4453-201ENST00000584019 89 ntBASIC14.42□□□□□ -0.1
H3F3AP84243 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
H3F3AP84243 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC14.42□□□□□ -0.1
H3F3AP84243 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
H3F3AP84243 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC14.42□□□□□ -0.1
H3F3AP84243 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.42□□□□□ -0.1
H3F3AP84243 AC112504.1-201ENST00000623415 1841 ntBASIC14.42□□□□□ -0.1
H3F3AP84243 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
H3F3AP84243 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
H3F3AP84243 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.42□□□□□ -0.1
H3F3AP84243 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
H3F3AP84243 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC14.42□□□□□ -0.1
H3F3AP84243 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.42□□□□□ -0.1
H3F3AP84243 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
H3F3AP84243 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.42□□□□□ -0.1
H3F3AP84243 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
H3F3AP84243 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
H3F3AP84243 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
H3F3AP84243 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
H3F3AP84243 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms