Protein–RNA interactions for Protein: P61088

UBE2N, Ubiquitin-conjugating enzyme E2 N, humanhuman

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2NP61088 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
UBE2NP61088 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
UBE2NP61088 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
UBE2NP61088 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
UBE2NP61088 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
UBE2NP61088 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
UBE2NP61088 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
UBE2NP61088 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.22□□□□□ -0.13
UBE2NP61088 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC14.22□□□□□ -0.13
UBE2NP61088 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
UBE2NP61088 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
UBE2NP61088 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC14.22□□□□□ -0.13
UBE2NP61088 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
UBE2NP61088 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
UBE2NP61088 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
UBE2NP61088 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC14.22□□□□□ -0.13
UBE2NP61088 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC14.22□□□□□ -0.13
UBE2NP61088 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
UBE2NP61088 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
UBE2NP61088 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
UBE2NP61088 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.22□□□□□ -0.13
UBE2NP61088 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
UBE2NP61088 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
UBE2NP61088 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
UBE2NP61088 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC14.22□□□□□ -0.13
UBE2NP61088 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC14.22□□□□□ -0.13
UBE2NP61088 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC14.22□□□□□ -0.13
UBE2NP61088 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.22□□□□□ -0.13
UBE2NP61088 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC14.22□□□□□ -0.13
UBE2NP61088 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC14.22□□□□□ -0.13
UBE2NP61088 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC14.22□□□□□ -0.13
UBE2NP61088 MIR4453-201ENST00000584019 89 ntBASIC14.22□□□□□ -0.13
UBE2NP61088 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.22□□□□□ -0.13
UBE2NP61088 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
UBE2NP61088 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC14.22□□□□□ -0.13
UBE2NP61088 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC14.22□□□□□ -0.13
UBE2NP61088 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC14.22□□□□□ -0.13
UBE2NP61088 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
UBE2NP61088 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
UBE2NP61088 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC14.22□□□□□ -0.13
UBE2NP61088 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
UBE2NP61088 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC14.22□□□□□ -0.13
UBE2NP61088 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
UBE2NP61088 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
UBE2NP61088 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
UBE2NP61088 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
UBE2NP61088 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
UBE2NP61088 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
UBE2NP61088 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
UBE2NP61088 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC14.22□□□□□ -0.13
UBE2NP61088 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC14.22□□□□□ -0.13
UBE2NP61088 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC14.22□□□□□ -0.13
UBE2NP61088 AC008677.1-201ENST00000519230 1561 ntBASIC14.22□□□□□ -0.13
UBE2NP61088 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
UBE2NP61088 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
UBE2NP61088 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
UBE2NP61088 AC008894.3-201ENST00000624324 3103 ntBASIC14.21□□□□□ -0.13
UBE2NP61088 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
UBE2NP61088 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
UBE2NP61088 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.21□□□□□ -0.13
UBE2NP61088 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
UBE2NP61088 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
UBE2NP61088 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
UBE2NP61088 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
UBE2NP61088 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
UBE2NP61088 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
UBE2NP61088 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
UBE2NP61088 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
UBE2NP61088 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
UBE2NP61088 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
UBE2NP61088 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC14.21□□□□□ -0.13
UBE2NP61088 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC14.21□□□□□ -0.13
UBE2NP61088 KLF2P3-201ENST00000451977 1087 ntBASIC14.21□□□□□ -0.13
UBE2NP61088 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
UBE2NP61088 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC14.21□□□□□ -0.13
UBE2NP61088 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC14.21□□□□□ -0.13
UBE2NP61088 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC14.21□□□□□ -0.13
UBE2NP61088 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC14.21□□□□□ -0.13
UBE2NP61088 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
UBE2NP61088 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC14.21□□□□□ -0.13
UBE2NP61088 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
UBE2NP61088 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
UBE2NP61088 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC14.21□□□□□ -0.13
UBE2NP61088 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
UBE2NP61088 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
UBE2NP61088 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
UBE2NP61088 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
UBE2NP61088 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC14.21□□□□□ -0.14
UBE2NP61088 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC14.21□□□□□ -0.14
UBE2NP61088 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
UBE2NP61088 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
UBE2NP61088 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
UBE2NP61088 AL035456.1-201ENST00000456064 1369 ntBASIC14.21□□□□□ -0.14
UBE2NP61088 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
UBE2NP61088 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC14.2□□□□□ -0.14
UBE2NP61088 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBE2NP61088 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBE2NP61088 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.2□□□□□ -0.14
UBE2NP61088 GRAMD4P3-201ENST00000621665 1669 ntBASIC14.2□□□□□ -0.14
UBE2NP61088 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms