Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC14.11□□□□□ -0.15
FOXG1P55316 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC14.11□□□□□ -0.15
FOXG1P55316 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC14.11□□□□□ -0.15
FOXG1P55316 AL096865.1-201ENST00000606796 927 ntBASIC14.11□□□□□ -0.15
FOXG1P55316 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.11□□□□□ -0.15
FOXG1P55316 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
FOXG1P55316 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
FOXG1P55316 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.11□□□□□ -0.15
FOXG1P55316 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
FOXG1P55316 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
FOXG1P55316 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
FOXG1P55316 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC14.11□□□□□ -0.15
FOXG1P55316 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
FOXG1P55316 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.11□□□□□ -0.15
FOXG1P55316 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.11□□□□□ -0.15
FOXG1P55316 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
FOXG1P55316 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC14.11□□□□□ -0.15
FOXG1P55316 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
FOXG1P55316 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
FOXG1P55316 BANP-204ENST00000393208 2283 ntTSL 2 BASIC14.11□□□□□ -0.15
FOXG1P55316 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
FOXG1P55316 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
FOXG1P55316 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
FOXG1P55316 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
FOXG1P55316 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
FOXG1P55316 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
FOXG1P55316 CROCCP1-201ENST00000426910 5675 ntBASIC14.1□□□□□ -0.15
FOXG1P55316 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
FOXG1P55316 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
FOXG1P55316 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
FOXG1P55316 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
FOXG1P55316 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC14.1□□□□□ -0.15
FOXG1P55316 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
FOXG1P55316 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
FOXG1P55316 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC14.1□□□□□ -0.15
FOXG1P55316 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.1□□□□□ -0.15
FOXG1P55316 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
FOXG1P55316 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
FOXG1P55316 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
FOXG1P55316 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
FOXG1P55316 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
FOXG1P55316 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
FOXG1P55316 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC14.1□□□□□ -0.15
FOXG1P55316 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
FOXG1P55316 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
FOXG1P55316 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
FOXG1P55316 MIR648-201ENST00000385046 94 ntBASIC14.1□□□□□ -0.15
FOXG1P55316 AZGP1P1-201ENST00000411909 902 ntBASIC14.1□□□□□ -0.15
FOXG1P55316 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC14.1□□□□□ -0.15
FOXG1P55316 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.1□□□□□ -0.15
FOXG1P55316 INGX-202ENST00000489074 768 ntBASIC14.1□□□□□ -0.15
FOXG1P55316 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.1□□□□□ -0.15
FOXG1P55316 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC14.1□□□□□ -0.15
FOXG1P55316 AC243562.2-201ENST00000561247 970 ntBASIC14.1□□□□□ -0.15
FOXG1P55316 AC010336.2-201ENST00000564226 506 ntBASIC14.1□□□□□ -0.15
FOXG1P55316 AL603832.2-201ENST00000566195 2125 ntBASIC14.1□□□□□ -0.15
FOXG1P55316 AC009407.1-201ENST00000568958 598 ntBASIC14.1□□□□□ -0.15
FOXG1P55316 PRR29-209ENST00000582540 967 ntTSL 2 BASIC14.1□□□□□ -0.15
FOXG1P55316 AC011467.4-201ENST00000594891 528 ntBASIC14.1□□□□□ -0.15
FOXG1P55316 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
FOXG1P55316 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
FOXG1P55316 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.1□□□□□ -0.15
FOXG1P55316 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
FOXG1P55316 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
FOXG1P55316 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC14.1□□□□□ -0.15
FOXG1P55316 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
FOXG1P55316 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
FOXG1P55316 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
FOXG1P55316 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.1□□□□□ -0.15
FOXG1P55316 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.1□□□□□ -0.15
FOXG1P55316 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
FOXG1P55316 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
FOXG1P55316 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
FOXG1P55316 CDC14C-201ENST00000428251 1719 ntBASIC14.1□□□□□ -0.15
FOXG1P55316 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
FOXG1P55316 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
FOXG1P55316 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.09□□□□□ -0.15
FOXG1P55316 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
FOXG1P55316 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.09□□□□□ -0.15
FOXG1P55316 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
FOXG1P55316 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
FOXG1P55316 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
FOXG1P55316 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
FOXG1P55316 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
FOXG1P55316 AC026691.1-201ENST00000602502 2017 ntBASIC14.09□□□□□ -0.15
FOXG1P55316 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
FOXG1P55316 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.09□□□□□ -0.15
FOXG1P55316 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.09□□□□□ -0.15
FOXG1P55316 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
FOXG1P55316 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
FOXG1P55316 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
FOXG1P55316 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC14.09□□□□□ -0.15
FOXG1P55316 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
FOXG1P55316 AC004987.2-201ENST00000395959 1148 ntBASIC14.09□□□□□ -0.15
FOXG1P55316 RAC2-204ENST00000406508 893 ntTSL 5 BASIC14.09□□□□□ -0.15
FOXG1P55316 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.09□□□□□ -0.15
FOXG1P55316 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14.09□□□□□ -0.15
FOXG1P55316 AL512638.1-201ENST00000457493 794 ntBASIC14.09□□□□□ -0.15
FOXG1P55316 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
FOXG1P55316 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms