Protein–RNA interactions for Protein: P55291

CDH15, Cadherin-15, humanhuman

Predictions only

Length 814 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH15P55291 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
CDH15P55291 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH15P55291 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC15.14■□□□□ 0.01
CDH15P55291 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CDH15P55291 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC15.14■□□□□ 0.01
CDH15P55291 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH15P55291 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC15.14■□□□□ 0.01
CDH15P55291 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH15P55291 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH15P55291 NSUN5P1-202ENST00000421140 1535 ntBASIC15.14■□□□□ 0.01
CDH15P55291 NSUN5P2-203ENST00000457352 1529 ntBASIC15.14■□□□□ 0.01
CDH15P55291 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
CDH15P55291 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH15P55291 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH15P55291 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH15P55291 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
CDH15P55291 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDH15P55291 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC15.14■□□□□ 0.01
CDH15P55291 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC15.14■□□□□ 0.01
CDH15P55291 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC15.14■□□□□ 0.01
CDH15P55291 MINOS1P3-201ENST00000457048 203 ntBASIC15.14■□□□□ 0.01
CDH15P55291 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC15.14■□□□□ 0.01
CDH15P55291 ABR-204ENST00000543210 1049 ntTSL 2 BASIC15.14■□□□□ 0.01
CDH15P55291 FICD-205ENST00000552758 603 ntTSL 2 BASIC15.14■□□□□ 0.01
CDH15P55291 ABR-217ENST00000572441 563 ntTSL 4 BASIC15.14■□□□□ 0.01
CDH15P55291 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC15.14■□□□□ 0.01
CDH15P55291 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.14■□□□□ 0.01
CDH15P55291 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDH15P55291 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC15.14■□□□□ 0.01
CDH15P55291 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.14■□□□□ 0.01
CDH15P55291 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CDH15P55291 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH15P55291 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH15P55291 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
CDH15P55291 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH15P55291 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH15P55291 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.14■□□□□ 0.01
CDH15P55291 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH15P55291 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH15P55291 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15.14■□□□□ 0.01
CDH15P55291 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDH15P55291 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC15.14■□□□□ 0.01
CDH15P55291 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.14■□□□□ 0.01
CDH15P55291 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.14■□□□□ 0.01
CDH15P55291 AC092919.2-201ENST00000623631 1645 ntBASIC15.14■□□□□ 0.01
CDH15P55291 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CDH15P55291 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC15.13■□□□□ 0.01
CDH15P55291 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH15P55291 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CDH15P55291 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH15P55291 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CDH15P55291 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.13■□□□□ 0.01
CDH15P55291 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH15P55291 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CDH15P55291 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.13■□□□□ 0.01
CDH15P55291 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CDH15P55291 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH15P55291 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CDH15P55291 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
CDH15P55291 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH15P55291 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CDH15P55291 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH15P55291 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
CDH15P55291 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC15.13■□□□□ 0.01
CDH15P55291 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
CDH15P55291 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH15P55291 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH15P55291 AC122714.2-201ENST00000502787 707 ntBASIC15.13■□□□□ 0.01
CDH15P55291 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC15.13■□□□□ 0.01
CDH15P55291 AP002469.2-201ENST00000531724 424 ntBASIC15.13■□□□□ 0.01
CDH15P55291 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CDH15P55291 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CDH15P55291 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC15.13■□□□□ 0.01
CDH15P55291 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CDH15P55291 AL121912.1-201ENST00000603683 238 ntBASIC15.13■□□□□ 0.01
CDH15P55291 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC15.13■□□□□ 0.01
CDH15P55291 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CDH15P55291 AC232323.1-201ENST00000540724 2099 ntBASIC15.13■□□□□ 0.01
CDH15P55291 REXO1L5P-201ENST00000622260 2098 ntBASIC15.13■□□□□ 0.01
CDH15P55291 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH15P55291 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH15P55291 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC15.13■□□□□ 0.01
CDH15P55291 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.13■□□□□ 0.01
CDH15P55291 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC15.13■□□□□ 0.01
CDH15P55291 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CDH15P55291 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.13■□□□□ 0.01
CDH15P55291 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
CDH15P55291 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH15P55291 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH15P55291 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CDH15P55291 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH15P55291 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC15.12■□□□□ 0.01
CDH15P55291 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC15.12■□□□□ 0.01
CDH15P55291 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH15P55291 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH15P55291 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC15.12■□□□□ 0.01
CDH15P55291 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CDH15P55291 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH15P55291 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH15P55291 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms