Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
USP11P51784 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
USP11P51784 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
USP11P51784 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC18.16■□□□□ 0.5
USP11P51784 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC18.16■□□□□ 0.5
USP11P51784 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC18.16■□□□□ 0.5
USP11P51784 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
USP11P51784 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
USP11P51784 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
USP11P51784 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC18.16■□□□□ 0.5
USP11P51784 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
USP11P51784 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC18.16■□□□□ 0.5
USP11P51784 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
USP11P51784 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
USP11P51784 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC18.16■□□□□ 0.5
USP11P51784 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC18.16■□□□□ 0.5
USP11P51784 AL512638.1-201ENST00000457493 794 ntBASIC18.16■□□□□ 0.5
USP11P51784 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC18.16■□□□□ 0.5
USP11P51784 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC18.16■□□□□ 0.5
USP11P51784 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC18.16■□□□□ 0.5
USP11P51784 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
USP11P51784 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
USP11P51784 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC18.16■□□□□ 0.5
USP11P51784 AC010336.2-201ENST00000564226 506 ntBASIC18.16■□□□□ 0.5
USP11P51784 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC18.16■□□□□ 0.5
USP11P51784 SSH2-210ENST00000582084 560 ntTSL 3 BASIC18.16■□□□□ 0.5
USP11P51784 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC18.16■□□□□ 0.5
USP11P51784 SPIB-207ENST00000597855 564 ntTSL 4 BASIC18.16■□□□□ 0.5
USP11P51784 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC18.16■□□□□ 0.5
USP11P51784 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
USP11P51784 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC18.16■□□□□ 0.5
USP11P51784 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
USP11P51784 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
USP11P51784 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC18.16■□□□□ 0.5
USP11P51784 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
USP11P51784 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC18.16■□□□□ 0.5
USP11P51784 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC18.16■□□□□ 0.5
USP11P51784 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
USP11P51784 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
USP11P51784 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
USP11P51784 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
USP11P51784 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
USP11P51784 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
USP11P51784 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
USP11P51784 AC011270.2-201ENST00000624293 2550 ntBASIC18.15■□□□□ 0.5
USP11P51784 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
USP11P51784 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
USP11P51784 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
USP11P51784 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
USP11P51784 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
USP11P51784 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
USP11P51784 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
USP11P51784 AZGP1P1-201ENST00000411909 902 ntBASIC18.15■□□□□ 0.5
USP11P51784 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC18.15■□□□□ 0.5
USP11P51784 HMGN1P19-201ENST00000436976 333 ntBASIC18.15■□□□□ 0.5
USP11P51784 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC18.15■□□□□ 0.5
USP11P51784 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
USP11P51784 RN7SL618P-201ENST00000477850 296 ntBASIC18.15■□□□□ 0.5
USP11P51784 EHF-205ENST00000527935 557 ntTSL 2 BASIC18.15■□□□□ 0.5
USP11P51784 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
USP11P51784 AL450472.2-201ENST00000603663 1156 ntBASIC18.15■□□□□ 0.5
USP11P51784 AL096865.1-201ENST00000606796 927 ntBASIC18.15■□□□□ 0.5
USP11P51784 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC18.15■□□□□ 0.5
USP11P51784 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
USP11P51784 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
USP11P51784 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
USP11P51784 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC18.15■□□□□ 0.5
USP11P51784 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
USP11P51784 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
USP11P51784 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC18.15■□□□□ 0.5
USP11P51784 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
USP11P51784 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
USP11P51784 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC18.15■□□□□ 0.5
USP11P51784 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC18.15■□□□□ 0.5
USP11P51784 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC18.15■□□□□ 0.5
USP11P51784 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
USP11P51784 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
USP11P51784 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
USP11P51784 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.5
USP11P51784 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC18.14■□□□□ 0.49
USP11P51784 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
USP11P51784 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
USP11P51784 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
USP11P51784 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC18.14■□□□□ 0.49
USP11P51784 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
USP11P51784 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
USP11P51784 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
USP11P51784 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
USP11P51784 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC18.14■□□□□ 0.49
USP11P51784 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC18.14■□□□□ 0.49
USP11P51784 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
USP11P51784 INGX-202ENST00000489074 768 ntBASIC18.14■□□□□ 0.49
USP11P51784 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC18.14■□□□□ 0.49
USP11P51784 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
USP11P51784 SPCS2P1-201ENST00000561636 679 ntBASIC18.14■□□□□ 0.49
USP11P51784 AC009407.1-201ENST00000568958 598 ntBASIC18.14■□□□□ 0.49
USP11P51784 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
USP11P51784 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC18.14■□□□□ 0.49
USP11P51784 AJ011932.1-201ENST00000621707 465 ntBASIC18.14■□□□□ 0.49
USP11P51784 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms